Transcript Information: S_Transcript_260175.p1


Annotated TAIR IDAT5G40820.1
Annotated Gene NameAtaxia telangiectasia-mutated and RAD3-related
Annotated Gene Symbol(s)ATRAD3, ATR, ATATR
Annotation TypeHomolog
Chromosome Positionchr5:16343860-16353847 | Reverse length=2702
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.098445978612658
Replicate 30.30484710546178
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.13873511773991


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_260175.p1 GENE.S_Transcript_260175~~S_Transcript_260175.p1 ORF type:3prime_partial len:909 (+),score=162.86 S_Transcript_260175:134-2857(+)
ATGGCAAGCCTGTCGAGCTTGGTGCACGAGCTTCGAGAACGAATAGCAGTTTCATCGTCAACACCTAAAGAAGACGACGTCGCTTTGGAGACCAGGTTCCGTTCCGTTCTCCCTAATCTCCTCAACGCCTATGTTATCGCCTCTCCCTCAGCCAATGAGAGAGAAGTAATTGCAGTATTAAAGCTACTGAATCACACTGCCAAGATATTCCCAGGAGTTCTGTACCATGGCAATTCCAATGCCGTCTTGCCTCTTATTGGCCGCATCTTGCCTTTCTTTGCCGAGCCTTCTTTTCGGGGTCAACATGCAGTGATTTTTGAAGCTGTTGGGGCCCTTCTAGCTTTGCTCCGAAGTGGTGATCGCAATGCATACCGGCAGTTTTTCATTGATTCTATGTTAGCCGTTGAAGATCTTGTTCTTGTAGCATCATTGTACTTCAGCAAATCAAGTACTGAAAAGTGTGTTAAGGTCTCTCTGAGATGCTTTTCAGATTCATTCACTGAAATATCTAATGCCGAAGCTCTACTGAGTGATCTTCCTGAATGTAACAAGCCTGGTGATGGTTATGGTATTTTGGTTGATGTCTCACTCAAGGAGAGGTGGCTATCCTTTTCTATTTGGATGATTCACCTCTTGAACAAATGCTTGACTGAGGGAACTCTATATGTTGAAGGACTTGTCACATCTTCTTTCCTTTTGTCCATATGCTCCATGTTATGTTATCAAGATGCCGACTTACATATGGCATGTTTTGGCTTCACTTGCACTATAGGGACAGCTATGAATGATGAAGTTGTTGTATATGAGAAATTTATTCTCACAATAGCAATTATATTGAGTGAAGCTGATGGCAACCTTCCTGTATACAGAGATATGGCATTTGATTCCACTATAGGTAGTTGCCTTCATGCTTTGCACTCCAGATGTCCTTCAGCTATTGTTAAATCTACAGCTGTGGAGCTAGTTTCTGTGTTCAACAACTCGTTGACAAAAACAAAAAGTTCCGAGTTGCAGGTTGCTCTATGCAGTGCGTATGTGCGGATATCTAGGACTTGTCCTCCTAATGTCTGGAAGCCAGCATCTCTGATAAGTATGATTGATTCCCCTGACATCTGCTTCATGTTAAAGGATTGCTTCGAGGTGGCTGTTGGTGTTCTTGGTCCTGACTGTGTTGGAGGAGGCAGCATTAGTGATATTTCTCTGGGGCAGTCCGCAGCATATGATAATAACTCAGGGAGTTTGAAAGCTGGGTGTAAAAGACCATCTGGGAATTTGGGGACTTCCAAAATCAAGCGTCTGAAAGTAGATGGGGAAATGGGATGTAGCTCTGATGGATGGGGAGCCTGCAGTTCCAGTCACCTATGGTCTGAGACAAATAAAAATTATGCTTCTGATATGTGGATGTCACTTGTTTCATATGTCGACTTGCTGAAACCTCCATGTGGCTATACCAATTTTATCAGGGAAGAAGTCGCCCTGGCAGCTCTTAGTATGCTTTGTACAGTCTTCTGTAAATATCCGAATACCAATTTATCACTCAGCATCTTTCAGAAGATCCATTTATGGATTCCATGGATTTGTAAGCAGGCAAATCAGGCCAACTCAGTAATGTTTGACTTGACAAGCTATCTGGAAGCATTGCACAACATACACTTGTTGCCAAGTTCATTTCCTGGGAATTTGAGAAACTCTTGGAGCGACAGTGATAATACAAATCTTATATATTCAATGCTTAAGCTCCCGTGGACCCATTTTCTTGAGGTCAATAAAACCCATCAAACATGGAGAACAAAGTGCCTTTCTATCCAAGTGCTGTCCAAGATTGGTCCTAAATCAGAGTCTCAACTTGATGTTTTGGATATGGGTCTCTATGATGAGGTGGAAGAAGTTAGCTTGCTTCAGAAAGAGGTGTGCGAGAATGTCAAAAGGAGAATTCCCTTTGCTCTTGGTTATTTGTCATGCTTGTATGGGTTTTTCCATGAATATGATGCAGATGTTACAAATGCTTATGACTATACAATATCCATTTATAGTGGTGAAAAGCAAAATGTGATGCTTGACTCTTTATTGGAAGGCTTTTCGTGTCCTAAGTGTGACCAAAGTGCTGATGTGGGTGATGCTGGGCATTATTTAGTCATAAGAGCTGCTGACACAAGAGGCCTGAACACCGGTGGTTGCAACTTTATTCACATACAGTCGTTGTTCTTCAATCTTCTTAATGATGAGTCCTCAGAAGAGGTCCAAATTGCCTGCATTGAGGTACTTCATCGAGTCATTGTACACGTTGGGAGGGATGTTCTGCTGAAAACTAGATCTGAGTGGATCAAATGTATTGAAGTGTTACTCCTTCACAGAAAGAGGTCTTTGAGGGAAGCATTCTGCACCCAGATTAGGTTTTTCTTGAAAGAATCTATCTTGAGTTTCTTATTTCCAGAGAGTGAGATATTGAATGCAAGTAAAGAGCACATGTTCCTTGACAAGATAAAAGTAGCTCTTGCAGCAACTGAAGATCCCCAAATTATCGTGACTTTGTTGGAGTCTGCAGCAGAGATTATGATGGCCGTTGATATAAAGTATCCGCTTTTCCTATCGTCTCTTATTCTACTAGTTGATAGGCTTGATGATCCTCATCTGACAGTGACAGTAACTGCTGCAAGGTTAATTAATAGGTCTTGCTATTTCCATCTGAGAGGAGGGATTCGGCTAGTCCTTTCTAAGGTTACG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_260175.p1 GENE.S_Transcript_260175~~S_Transcript_260175.p1 ORF type:3prime_partial len:909 (+),score=162.86 S_Transcript_260175:134-2857(+)
MASLSSLVHELRERIAVSSSTPKEDDVALETRFRSVLPNLLNAYVIASPSANEREVIAVLKLLNHTAKIFPGVLYHGNSNAVLPLIGRILPFFAEPSFRGQHAVIFEAVGALLALLRSGDRNAYRQFFIDSMLAVEDLVLVASLYFSKSSTEKCVKVSLRCFSDSFTEISNAEALLSDLPECNKPGDGYGILVDVSLKERWLSFSIWMIHLLNKCLTEGTLYVEGLVTSSFLLSICSMLCYQDADLHMACFGFTCTIGTAMNDEVVVYEKFILTIAIILSEADGNLPVYRDMAFDSTIGSCLHALHSRCPSAIVKSTAVELVSVFNNSLTKTKSSELQVALCSAYVRISRTCPPNVWKPASLISMIDSPDICFMLKDCFEVAVGVLGPDCVGGGSISDISLGQSAAYDNNSGSLKAGCKRPSGNLGTSKIKRLKVDGEMGCSSDGWGACSSSHLWSETNKNYASDMWMSLVSYVDLLKPPCGYTNFIREEVALAALSMLCTVFCKYPNTNLSLSIFQKIHLWIPWICKQANQANSVMFDLTSYLEALHNIHLLPSSFPGNLRNSWSDSDNTNLIYSMLKLPWTHFLEVNKTHQTWRTKCLSIQVLSKIGPKSESQLDVLDMGLYDEVEEVSLLQKEVCENVKRRIPFALGYLSCLYGFFHEYDADVTNAYDYTISIYSGEKQNVMLDSLLEGFSCPKCDQSADVGDAGHYLVIRAADTRGLNTGGCNFIHIQSLFFNLLNDESSEEVQIACIEVLHRVIVHVGRDVLLKTRSEWIKCIEVLLLHRKRSLREAFCTQIRFFLKESILSFLFPESEILNASKEHMFLDKIKVALAATEDPQIIVTLLESAAEIMMAVDIKYPLFLSSLILLVDRLDDPHLTVTVTAARLINRSCYFHLRGGIRLVLSKVT

Click here to download the sequence:
Link to NCBI Protein BLAST