Transcript Information: S_Transcript_260200.p2


Annotated TAIR IDAT1G02420.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:493683-495158 | Forward length=491
E-Value5.7E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.56623406883363
Replicate 20.2347105272076
Replicate 30.78479728015322
Condition 2: 8 Hour
Replicate 10.68059756331276
Replicate 20.71399516935298
Replicate 31.2472038492276
Condition 3: 24 Hour
Replicate 10
Replicate 20.24110437847178
Replicate 30.53663924266204


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_260200.p2 GENE.S_Transcript_260200~~S_Transcript_260200.p2 ORF type:complete len:188 (+),score=4.41 S_Transcript_260200:80-565(+)
ATGGCTTTCAAACTCAACCAATATTTCCGACTTCTAACAAGATATCCTCGCTTTCCTCCTCTTTCCACCATTCAAACCCGATTCCTCTACACCGAAACCCCATCAGACAAAGACATCGACAAAATATTCCAAATAATCAACGACTCCACATCGTCCCAAAACCTGACTCAATCCATCAAATCAACTGGTATTCCCTTAACAAACCAACTGGTAGATAAAGTTCTCAAAAGGGTTCGTTTTAGTCACTCTAAGCCACTTCAAGCTCTTGACTTCTTCAACTATATAGGGAGAAAAAAAGGCTTTTACCACACCCCATTTTCAATTGACACAATGCTCTACATTCTAGGAAGAACCCGGAAATTTGACAAAATTTGGGAGGTTTTAATGGAGACTAAGAGAAAAGATAGAACCTTGATTACACCAAGGACCATGCAAGTTGTGTTGGGTAGGATTGCTAAGGTTTGTTCAGTTAGACAAACTGTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_260200.p2 GENE.S_Transcript_260200~~S_Transcript_260200.p2 ORF type:complete len:188 (+),score=4.41 S_Transcript_260200:80-565(+)
MAFKLNQYFRLLTRYPRFPPLSTIQTRFLYTETPSDKDIDKIFQIINDSTSSQNLTQSIKSTGIPLTNQLVDKVLKRVRFSHSKPLQALDFFNYIGRKKGFYHTPFSIDTMLYILGRTRKFDKIWEVLMETKRKDRTLITPRTMQVVLGRIAKVCSVRQTV*

Click here to download the sequence:
Link to NCBI Protein BLAST