Transcript Information: S_Transcript_260532.p1


Annotated TAIR IDAT5G19350.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6518978-6521295 | Forward length=425
E-Value2.8E-202
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.219274926937
Replicate 220.490385847402
Replicate 319.305313940517
Condition 2: 8 Hour
Replicate 122.797744659741
Replicate 218.385773158261
Replicate 318.277508525429
Condition 3: 24 Hour
Replicate 117.368871728602
Replicate 217.969525436926
Replicate 316.121885844696


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_260532.p1 GENE.S_Transcript_260532~~S_Transcript_260532.p1 ORF type:complete len:449 (+),score=96.72,RRM_1|PF00076.18|1.2e-11,RRM_1|PF00076.18|2.9e-16,RRM_1|PF00076.18|1.6e-15,RRM_6|PF14259.2|0.00016,RRM_6|PF14259.2|1.8e-05,RRM_6|PF14259.2|1.6e-09,RRM_5|PF13893.2|0.0002,RRM_5|PF13893.2|0.78,RRM_5|PF13893.2|6.6e-08,RRM_5|PF13893.2|9.7e+03 S_Transcript_260532:43-1347(+)
ATGGCGGCACCGCTACCACAACCACAACCACAGCCACAGCCACAGCATCACCAACCACAAACGCTAGAAGAAGTAAGAACCCTTTGGATTGGCGACCTTCAAATTTGGGTCGATGAAAGTTATCTTCACTCCTGCTTTGCTCATACTGGCGAGGTTGTATCTGTAAAGGTAATACGTAATAAGATTACTGGGCATCCAGAGGGGTATGGGTTTGTTGAGTTTGTTTCACTTGCAGCTGCGGAACGTGTATTGCAAACATATAATGGAACTCCCATGCCAGGAACTGAGCAACCTTTTAGATTAAACTGGGCTTCTTTTGGGATTGGAGAAAGAAGACCTGATGCAGGCCCCGAGCATTCTATCTTTGTTGGGGATTTGGCACCTGATGTTTCAGATTATCTGTTGCAAGAGACCTTTCGAGCTCACTATCCCTCAGTGAGGGGGGCAAAAGTTGTCACTGATCCAAGCACGGGACGTTCAAAGGGGTATGGGTTTGTTAAATTTGCTGATGAGACAGAGAGAAATAGAGCCATGAACGAAATGAATGGTCAATATTGTTTATCGAGACCGATGCGTATTAGTGCTGCAACACCAAAAAAAGCACCTGGTGTTCAGCAGCAGTATGCTGCGGCTAAAGCTATATATCCTGCTCCAGCATACGTAATGCCCACACTGCCAACAGTTCAACCACTAGCAATGGAGAATGATCCAAATAATACTACGATTTATATTGGTAATTTGGACCCAATTGTGACAGAAGAAGACCTGAGACAACATTGCTTGCTGTTTGGAGAGATTGGTTATGTTAAAATCCCCGCTAGTAAAGGGTGTGGTTTTGTGCAGTTTGCAGCTAGAGCATCTGCAGAGGAAGCTATACAGAAGCTGCAAGGAACGGTGATTGGTCAGCAAGTAGTTCGTGTTTCCTGGGGCAGGAGCCCAACTGCCAAACAGGATGCTGGTGCCTGGGGTCAGCAAGTAGATCCAAGTCAATGGAGTGCATATTATGGATATGGGCAAGGATATGATGCTTATTCATATGGTGCTGTTCAGGATCCATCATTATATGCCTATGGTGCATATGCTGGTTATGCTCAATATTCACAACAGCCTGAAGGTGCACAAGATATGGCGGCTTCAGGAATGGAGCAAAAGGAGGAGCTTTTTGATCCCTTGGCTACTCCTGATGTGGATCAGCTGAATGCCGCTTATCTTGCCATCCATGGAAGAGCAATTCTGGGCCGCCCAATGTGGTTGACAACCTCTTCAGTTGGAAGACAACCTTCAGCCATTAATAGCTCCCAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_260532.p1 GENE.S_Transcript_260532~~S_Transcript_260532.p1 ORF type:complete len:449 (+),score=96.72,RRM_1|PF00076.18|1.2e-11,RRM_1|PF00076.18|2.9e-16,RRM_1|PF00076.18|1.6e-15,RRM_6|PF14259.2|0.00016,RRM_6|PF14259.2|1.8e-05,RRM_6|PF14259.2|1.6e-09,RRM_5|PF13893.2|0.0002,RRM_5|PF13893.2|0.78,RRM_5|PF13893.2|6.6e-08,RRM_5|PF13893.2|9.7e+03 S_Transcript_260532:43-1347(+)
MAAPLPQPQPQPQPQHHQPQTLEEVRTLWIGDLQIWVDESYLHSCFAHTGEVVSVKVIRNKITGHPEGYGFVEFVSLAAAERVLQTYNGTPMPGTEQPFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVSDYLLQETFRAHYPSVRGAKVVTDPSTGRSKGYGFVKFADETERNRAMNEMNGQYCLSRPMRISAATPKKAPGVQQQYAAAKAIYPAPAYVMPTLPTVQPLAMENDPNNTTIYIGNLDPIVTEEDLRQHCLLFGEIGYVKIPASKGCGFVQFAARASAEEAIQKLQGTVIGQQVVRVSWGRSPTAKQDAGAWGQQVDPSQWSAYYGYGQGYDAYSYGAVQDPSLYAYGAYAGYAQYSQQPEGAQDMAASGMEQKEELFDPLATPDVDQLNAAYLAIHGRAILGRPMWLTTSSVGRQPSAINSSQ*

Click here to download the sequence:
Link to NCBI Protein BLAST