Transcript Information: S_Transcript_26054.p1


Annotated TAIR IDAT1G16280.1
Annotated Gene NameRNA helicase 36
Annotated Gene Symbol(s)RH36, AtRH36, SWA3
Annotation TypeOrtholog
Chromosome Positionchr1:5568482-5570487 | Reverse length=491
E-Value6.1E-234
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.310513663123
Replicate 27.3840979249289
Replicate 38.3048426177674
Condition 2: 8 Hour
Replicate 17.7861465660932
Replicate 26.8522295022286
Replicate 36.5720260364243
Condition 3: 24 Hour
Replicate 18.3746105065361
Replicate 27.6312225591758
Replicate 35.729957349641


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_26054.p1 GENE.S_Transcript_26054~~S_Transcript_26054.p1 ORF type:complete len:493 (+),score=89.01,DEAD|PF00270.25|6.3e-43,DEAD|PF00270.25|3.9e+03,Helicase_C|PF00271.27|2.2e+02,Helicase_C|PF00271.27|3.9e+03,Helicase_C|PF00271.27|6.3e-27,ResIII|PF04851.11|2.4e-05,ResIII|PF04851.11|3.5e+03 S_Transcript_26054:282-1760(+)
ATGGATGAAGATACTCGAGTTGACGAGAGTTTTCCCCTTTTTTCCAAGCGGAAGAAAGTTTCTTCCAAGAAACAGCAACCCACCAGCATCCCCAAAGAAAATAACACCCAGAGCTCAGATGAGCAAGAGAGAGTTGAAAAGGAGAGCCACTCTGGGGCACCCTCCTCTTCTTTTGCTGATTTAGGCCTCTCGGAATGGACTGTCAATACCTGCTCTGAGCTCGGGATGAAAAAACCCACCCCTGTTCAATACTATTGCATTCCAAAAATCCTTGCAGGCCATGACGTGCTTGGCCTGGCTCAAACTGGTAGTGGAAAAACTGCTGCCTTTGCGCTTCCGATTCTTCAGCAGTTGGCCGAGGACCCATATGGGGTTTTTGCCCTTGTTGTTACTCCAACTCGGGAATTGGCTTATCAGTTGGCCGAGCAGTTTCGTGCCCTTGGATCAACACTCCATGTTCGTTGTACCGTTGTCGTTGGAGGCATGGACATGATCACCCAAGCCAAGACGCTGTTGCAACGGCCCCATATTGTTATTTCAACTCCGGGAAGAATAAAGGTCCTGCTTGAACAGAACCCAGATATTCCTCCAGTATTTGCGAGAACTAAGTTTCTCGTACTGGACGAAGCAGATAGAGTACTCGATGTTGGATTTGAGGAGGAACTGAGAGTAATATTTCAGTGCTTGCCCAAAAAAAGACAAACTTTATTATTTTCAGCGACAATGACCAGTGACCTACAAATGTTACTTGAGCTTTCTGCAAACAAAGCCTACTTTTATGAGGCTTATGAAGGCTTTAAGACTGTGGAATCTCTTAGACAACAGTATCTTTTTATTCCCAAAAATGTTAAGGATGTCTATCTTCTGCATCTCTTGTCAAAGATGGAAGACATGGGAGTGCGGTCAGCCATTATATTCGTCTCTAGATGCAGAACATGTCACCTTTTGAATTTGTTGTTAGAAGAGCTTGATCAAGATGTGGCAGCACTACACTCAATGAAATCGCAGTCCTTAAGACTTGCTGCTTTACACCAATTCAAATCTGGTCAGGTTCCAGTTTTGCTTGCGACAGATGTTGCCAGTCGTGGACTAGATATCCCAACTGTGGATCTTGTTATAAATTATGACATACCAAGGTATCCTAGAGATTATGTTCATCGTGTGGGACGTACTGCAAGAGCAGGAAGAGGAGGGCTTGCAGTGAGCATCGTTACACAGAATGATGTGGAGCTAGTACATGGAATAGAAGCAGAACTTGGGAAGCAACTGGAAGAATTTGAATGTAAAGAAAAAGAGGTTCTTGCCGACATCACAAAGGTTTACAAAGCAAGACGAGTTGCAACAATGAAGATGTTGGATGACGGCTTTGAGGATCAAGTGAAACAACGCCAAAAACAGAAACAGAAAACACTAGCAGAGAAAGGACTGTTGAATAAGAAGTTACGAAAACGGAAGAAAACAAAGGAAACGGAAGCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_26054.p1 GENE.S_Transcript_26054~~S_Transcript_26054.p1 ORF type:complete len:493 (+),score=89.01,DEAD|PF00270.25|6.3e-43,DEAD|PF00270.25|3.9e+03,Helicase_C|PF00271.27|2.2e+02,Helicase_C|PF00271.27|3.9e+03,Helicase_C|PF00271.27|6.3e-27,ResIII|PF04851.11|2.4e-05,ResIII|PF04851.11|3.5e+03 S_Transcript_26054:282-1760(+)
MDEDTRVDESFPLFSKRKKVSSKKQQPTSIPKENNTQSSDEQERVEKESHSGAPSSSFADLGLSEWTVNTCSELGMKKPTPVQYYCIPKILAGHDVLGLAQTGSGKTAAFALPILQQLAEDPYGVFALVVTPTRELAYQLAEQFRALGSTLHVRCTVVVGGMDMITQAKTLLQRPHIVISTPGRIKVLLEQNPDIPPVFARTKFLVLDEADRVLDVGFEEELRVIFQCLPKKRQTLLFSATMTSDLQMLLELSANKAYFYEAYEGFKTVESLRQQYLFIPKNVKDVYLLHLLSKMEDMGVRSAIIFVSRCRTCHLLNLLLEELDQDVAALHSMKSQSLRLAALHQFKSGQVPVLLATDVASRGLDIPTVDLVINYDIPRYPRDYVHRVGRTARAGRGGLAVSIVTQNDVELVHGIEAELGKQLEEFECKEKEVLADITKVYKARRVATMKMLDDGFEDQVKQRQKQKQKTLAEKGLLNKKLRKRKKTKETEA*

Click here to download the sequence:
Link to NCBI Protein BLAST