Transcript Information: S_Transcript_260617.p1


Annotated TAIR IDAT4G24790.1
Annotated Gene NameAAA-type ATPase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:12778222-12781345 | Forward length=857
E-Value1.2E-214
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3225855159302
Replicate 21.4441098619464
Replicate 30.67064494849457
Condition 2: 8 Hour
Replicate 11.60263539353
Replicate 21.0846956916231
Replicate 32.5837391036341
Condition 3: 24 Hour
Replicate 10.45013699313952
Replicate 20.82413860277627
Replicate 31.0700261262777


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_260617.p1 GENE.S_Transcript_260617~~S_Transcript_260617.p1 ORF type:complete len:825 (+),score=149.12,DNA_pol3_delta2|PF13177.2|1.3e-21,AAA|PF00004.25|5.5e-08,DNA_pol3_gamma3|PF12169.4|1.1e-06 S_Transcript_260617:1037-3511(+)
ATGGGTGATCTTTTAAGCCGAGTAGGCAGTCCATCAATTTGTGCCAGTGATACTATGTTTGATGGTTCAACTCGTAGCCCATCACTATTTGCTAATTATGAGCTTGAGGCTCTAGATCGAGACTTCCAAGGATGCGGGTTAACCTGCTGCTGGTCAAGAACCCCCAGATATAGAGACTCTAATCTTGGTTCTGAAGGAGAAGAGTACCCATTGATATCAGGTGAAACTGGTGACACTGAAGTGTCTGGACGAAGTAGGAACTGGAAACACATTAACAATGAAATCGTTCCATATTCTGAGAGTCCGAGGAGTCTGAGTCAAAAATTTAGGCCAAAATCGTTTGATGAATTGGTTGGGCAAAGTGTGGCTGCAAGGTCACTTTTAGGTGCCATCTCAAAAGGAAGGATAACTTCTTTCTATCTCTTCCATGGTCCTCGTGGTACTGGCAAGACTCCAGCATCAAGGATTTTTGCTGCTGCTATGAATTGCCTCTCTATGGAGGAACGCAGGCCGTGTGGATCATGCCAGGAATGTACATTGTATTTTGCAGGTAGGAGCAGAGATGTTAAGGAATTGGATTCTGTGACAATTAACCGTTCAGGGAGGATTCGATCCCTTGTTAAGAATGCAGCTTTACCTCCAGTTTCGTCAAAATTTAAGGTCTTCATTTTGGATGAGTGTCATTTGCTTCGAAGTGATACATGGGCCACTCTTTTGACTAGCCTGGATACCTTCTCTCAACATGTTGTATTTCTTATGATCACTCCAGACCTGGATAAGTTGCCTAGAAGTGTGGTTGCTCGGTCTCAAAGATATCACTTTCCGAAATTAAAGGATATTGATGTTGCAGATAGACTAAAGAAAATTTGTATGGAAGAAGGTTTGCAGTTTGAGCAGGCTGCTTTAGATTTCATAGCTTCGAAATCCAATGGTTCGATGCGAGATGCTGAAATGATGCTGGATCAACTTAGTTTGCTCGGCAGCCAGATCACCATGACCTTGGCCTATGAACTTATTGGGACCATTTCAGATGATGAGCTGCTTGATTTACTGGACCTGGCTCTTTCATCTGACACTTCAAATACAGTAAAAAGGGCAAGGGAGCTGATGAGATCGAGGATTGACCCTATGCAACTGATATCCCAACTAGCCAATATCATAATGGATGTTCTTGCAGGGAAATGCCAGGAAGAGGATTCTGAAGTGCGGAGGAACTTTTTCCAAAGACATGCTTCTGAGGCAGATCTGCAGAAGCTTCGTCATGCACTGAAGATACTATCAGAAAGTGAAAAACAGCTCAGAGTGTCAAAAAATCAAACTACTTGGCTTACTGTAGCTCTGCTGCAATTGAACTCTGTGGATTCCTCTTTCTCAGATCCAAATGAGTCAAGGTTGTCTGTCAGAACTGCAAACTCTGAAGCTGCAGATGGTGACTGTTGCAGTACATCATCACCTGGTGAGAGATCAAGACATTTGGGCGCATATGATTCTGTTGATGTTGAATTGCGAAAAATGGTTGCGCAAGGAGAATGTGGAGGTACTCTTGAATCCTTATGGATGAGAGCCACTGATATAAGCCAGTCCAATTCGCTTAAGAACTTCCTACGAAAACGAGGGAAGCTGTATTCGGTGTGGATGAAGAAAGATCTGGCAGTGGCTGAATTGGAGTTTGATCATCCTGATTACGCGTCCAAGGCTGAAAAATCCTGGAAAACAATTGCTAGCTCGCTTCAATCTGTTCTAGGATGTAATGTGGAGATTAGGATCAACCTTGCATCTAGTTATGCTAAATCAAAGAGGCCATCTTTCAGCTTGTTTAGTTGTTCCCGCAGAATACAAAAATCACAAACAATGGCTGAAAGCGGGAGTGATCGGTTATCAGATGCCTCTAATTTCACTTCTGACAGAGCTATGATGGGAGACAGGCATGTTGATACTTGTTCGACATGTGGGTCCCAAGTCTCTCATATCTGCAGCCACAGAATGGTCAGTACACTAAGAAACAGTGATGGCAACGCTCTAACTACTGGACGGTCAGGAGCATCAAGTCCTCACAGAGCTTCACAAGAGAGCATATTAAGTGAGCATGGTCTTATGATGGACTCTTCCAAGGAAAAAACATGCAAAATTTTGACCGTTCAAGAAGAGGAGGTTCAACCCAATTGTTTTCCTAAGACTATGAAGCTTAATAAGAAATTCGGTACATCAGAAACTTCTGAAGTGGTCTGCCTAAAGGTTAAGCCGAAGGACAATCTCAGGACAGCATCCTTTGATACGTATATCTGCACTGACTATCCTTACATCTTAAGGAACAACAGCGATGCTTCACGACATGAAGACGGAAAAACAGAAGAATCAAAGTCAAATTGCTGGAGTACGCCGCCCCTTCCAATGAAAAAGGCATGGCAAATGAAGCACCAACGACAAAAACATCATCTCGTGGAATGGGTTCTACCTTGTGCTGCAGCCAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_260617.p1 GENE.S_Transcript_260617~~S_Transcript_260617.p1 ORF type:complete len:825 (+),score=149.12,DNA_pol3_delta2|PF13177.2|1.3e-21,AAA|PF00004.25|5.5e-08,DNA_pol3_gamma3|PF12169.4|1.1e-06 S_Transcript_260617:1037-3511(+)
MGDLLSRVGSPSICASDTMFDGSTRSPSLFANYELEALDRDFQGCGLTCCWSRTPRYRDSNLGSEGEEYPLISGETGDTEVSGRSRNWKHINNEIVPYSESPRSLSQKFRPKSFDELVGQSVAARSLLGAISKGRITSFYLFHGPRGTGKTPASRIFAAAMNCLSMEERRPCGSCQECTLYFAGRSRDVKELDSVTINRSGRIRSLVKNAALPPVSSKFKVFILDECHLLRSDTWATLLTSLDTFSQHVVFLMITPDLDKLPRSVVARSQRYHFPKLKDIDVADRLKKICMEEGLQFEQAALDFIASKSNGSMRDAEMMLDQLSLLGSQITMTLAYELIGTISDDELLDLLDLALSSDTSNTVKRARELMRSRIDPMQLISQLANIIMDVLAGKCQEEDSEVRRNFFQRHASEADLQKLRHALKILSESEKQLRVSKNQTTWLTVALLQLNSVDSSFSDPNESRLSVRTANSEAADGDCCSTSSPGERSRHLGAYDSVDVELRKMVAQGECGGTLESLWMRATDISQSNSLKNFLRKRGKLYSVWMKKDLAVAELEFDHPDYASKAEKSWKTIASSLQSVLGCNVEIRINLASSYAKSKRPSFSLFSCSRRIQKSQTMAESGSDRLSDASNFTSDRAMMGDRHVDTCSTCGSQVSHICSHRMVSTLRNSDGNALTTGRSGASSPHRASQESILSEHGLMMDSSKEKTCKILTVQEEEVQPNCFPKTMKLNKKFGTSETSEVVCLKVKPKDNLRTASFDTYICTDYPYILRNNSDASRHEDGKTEESKSNCWSTPPLPMKKAWQMKHQRQKHHLVEWVLPCAAAK*

Click here to download the sequence:
Link to NCBI Protein BLAST