Transcript Information: S_Transcript_261042.p1


Annotated TAIR IDAT5G63110.1
Annotated Gene Namehistone deacetylase 6
Annotated Gene Symbol(s)HDA6, AXE1, ATHDA6, RTS1, RPD3B, SIL1
Annotation TypeOrtholog
Chromosome Positionchr5:25315834-25318227 | Reverse length=471
E-Value1.2E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4006842755358
Replicate 20.77413296693034
Replicate 31.0785225779883
Condition 2: 8 Hour
Replicate 11.1223889640596
Replicate 20.91580666946249
Replicate 31.1218867160516
Condition 3: 24 Hour
Replicate 11.788469993382
Replicate 21.1928321882288
Replicate 31.9174653641316


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_261042.p1 GENE.S_Transcript_261042~~S_Transcript_261042.p1 ORF type:internal len:171 (-),score=4.90,Hist_deacetyl|PF00850.15|6.4e-08 S_Transcript_261042:1-510(-)
CCCGTATCGAACTCCCCTCTCTCTTTTTCTTTCTTTCGCCCAAATTCCCCCCCAATGCCTCTCAACATTTCCCTTCCTCCAACAATGGAAGCCAACAGCAACACAGTAGAACAAGGAGGAGGAGCCTCGCTGCCATCCCAAACCTGCACAGACGCCAAGAAACGCCGAGTAACCTACTTCTACGAACCCACAATCGGGGACTACTACTACGGTCAAGGCCACCCAATGAAACCCCACCGGATCCGTATGGCCCACAATCTCATTGTTCACTACTCCCTCCACCGTCGCATGGAAATCAACCGCCCTTTCCCCGCCGCATCCACCGACATCCGCCGCTTCCACTCCGACGACTACGTCGACTTCCTCTCCTCCGTCTCACCCGACCTCTGTGGGCTGCCCAACAGTGGTGGTTCCCAGTCCCAGAAGCCAATGCTTGACCACTCTCACTCCAGGCACCTCAAGCGGTTCAATGTTGGCGATGATTGTCCGGTTTTCCCCGGTTTGTTCCCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_261042.p1 GENE.S_Transcript_261042~~S_Transcript_261042.p1 ORF type:internal len:171 (-),score=4.90,Hist_deacetyl|PF00850.15|6.4e-08 S_Transcript_261042:1-510(-)
PVSNSPLSFSFFRPNSPPMPLNISLPPTMEANSNTVEQGGGASLPSQTCTDAKKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYSLHRRMEINRPFPAASTDIRRFHSDDYVDFLSSVSPDLCGLPNSGGSQSQKPMLDHSHSRHLKRFNVGDDCPVFPGLFP

Click here to download the sequence:
Link to NCBI Protein BLAST