Transcript Information: S_Transcript_26119.p1


Annotated TAIR IDAT1G74850.1
Annotated Gene Nameplastid transcriptionally active 2
Annotated Gene Symbol(s)PTAC2
Annotation TypeOrtholog
Chromosome Positionchr1:28119237-28122314 | Reverse length=862
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.123566729706
Replicate 232.25731990478
Replicate 334.490036331055
Condition 2: 8 Hour
Replicate 133.654897592441
Replicate 236.720689491413
Replicate 337.118976001778
Condition 3: 24 Hour
Replicate 127.72040387772
Replicate 229.567156481787
Replicate 325.946815796068


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_26119.p1 GENE.S_Transcript_26119~~S_Transcript_26119.p1 ORF type:complete len:870 (+),score=160.14,PPR_2|PF13041.2|0.0028,PPR_2|PF13041.2|5.1e-08,PPR_2|PF13041.2|7.1e-13,PPR_2|PF13041.2|9.2e-12,PPR_2|PF13041.2|4.2e-12,PPR_2|PF13041.2|0.11,PPR_2|PF13041.2|1.7e-14,PPR_2|PF13041.2|5.2e-07,PPR_2|PF13041.2|7e-10,PPR_2|PF13041.2|0.014,PPR_2|PF13041.2|3.3e-05,PPR_2|PF13041.2|8e-06,PPR_2|PF13041.2|5.2e-07,PPR_2|PF13041.2|0.0016,PPR_2|PF13041.2|0.0084,PPR_2|PF13041.2|2.2e+03,PPR_2|PF13041.2|1.5,PPR|PF01535.16|19,PPR|PF01535.16|0.00011,PPR|PF01535.16|2.5e-08,PPR|PF01535.16|0.027,PPR|PF01535.16|5.5e-07,PPR|PF01535.16|0.23,PPR|PF01535.16|3.7e-07,PPR|PF01535.16|2e-05,PPR|PF01535.16|7.2e-05,PPR|PF01535.16|0.061,PPR|PF01535.16|4.6,PPR|PF01535.16|0.016,PPR|PF01535.16|0.072,PPR|PF01535.16|0.86,PPR|PF01535.16|0.011,PPR|PF01535.16|5.7e+02,PPR|PF01535.16|6.6,PPR_1|PF12854.3|0.0001,PPR_1|PF12854.3|6.3e-06,PPR_1|PF12854.3|0.36,PPR_1|PF12854.3|5.6e-07,PPR_1|PF12854.3|0.089,PPR_1|PF12854.3|3.5e-06,PPR_1|PF12854.3|2e-06,PPR_1|PF12854.3|0.009,PPR_1|PF12854.3|0.54,PPR_1|PF12854.3|95,PPR_1|PF12854.3|0.018,PPR_1|PF12854.3|12,PPR_1|PF12854.3|0.48,PPR_1|PF12854.3|0.00064,PPR_1|PF12854.3|3e+03,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|22,PPR_3|PF13812.2|4e-05,PPR_3|PF13812.2|0.00073,PPR_3|PF13812.2|0.00091,PPR_3|PF13812.2|4.7,PPR_3|PF13812.2|0.00023,PPR_3|PF13812.2|0.075,PPR_3|PF13812.2|0.0038,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|2.3e+03,PPR_3|PF13812.2|0.24,PPR_3|PF13812.2|0.57,PPR_3|PF13812.2|3.2e+02,PPR_3|PF13812.2|22,PPR_3|PF13812.2|9.9e+02,PPR_3|PF13812.2|80,ECSIT|PF06239.7|8.3e+02,ECSIT|PF06239.7|1.6e+03,ECSIT|PF06239.7|10,ECSIT|PF06239.7|0.25,ECSIT|PF06239.7|61,ECSIT|PF06239.7|56,TPR_14|PF13428.2|1.2e+04,TPR_14|PF13428.2|1.7e+02,TPR_14|PF13428.2|4.6e+03,TPR_14|PF13428.2|1.2e+02,TPR_14|PF13428.2|3.9e+03,TPR_14|PF13428.2|1.5e+03,TPR_14|PF13428.2|6.5e+03,TPR_14|PF13428.2|1.8e+02,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|0.62,RPM2|PF08579.7|1.7e+02,RPM2|PF08579.7|0.84,RPM2|PF08579.7|7.8e+02,RPM2|PF08579.7|1.1e+03,RPM2|PF08579.7|5.1,RPM2|PF08579.7|1.3e+04,RPM2|PF08579.7|4.3e+03 S_Transcript_26119:900-3509(+)
ATGCTAAAAACCCTCACTTTTTCCCTTTCTATTTCATCCCAATCTATCCTTTCTCCAAAACCCAATAACCCATTAATCCCCAATTCATTTTCCCACAAAAAGTTTGCATTTTTATCAAAACCCCTTCTTGTTTCTTCAGAGTTTAAGGTCAAAGCCAAACCTAAAGACCTAATCTTGGGAAATCCATCAGTCACTGTTGAAAAGGGTAAGTATAGTTATGATGTTGAGACTTTAATTAACAAGCTTAGTAGCCTCCCACCAAGGGGTTCTATTGCTAGGTGTCTTGATTCTTTTAAAAACAAGCTTTCTCTTAATGATTTTGCCTTAGTTTTTAAGGAGTTTGCTCAAAGAGGCGACTGGCAAAGGTCCTTAAGGTTGTTTAAGTATATGCAGCGCCAAATTTGGTGCAAACCCAATGAACATATTTATACTATTATTATTGGGGTGCTTGGTAGAGAAGGGTTACTTGAGAAATGCCATGAAGTGTTTGATGAAATGTCTGTTCATAATGTGCCTCGTAGCGTCTTCTCTTATACTGCTTTGATTAATGCTTATGGTAGGAATGGTAAGTACGAGATTGCCCTTGAGTTGTTGAGTAGAATGAAGCGAGAGAGGGTCGTGCCGAGTATTTTGACTTATAATACTGTGATTAATTCTTGTGCTAGAGGAGGGTTGGATTGGGAAGAATTGTTGGGGTTGTTTGCTGAGATGAGGCATGAGGGGATTCAGCCTGATATTGTGACTTATAATACTTTGCTTAGTGCTTGCGCTAGTAGAGGGCTCGGTGATGAGGCCGAGATGGTGTTTAGGACGATGAATGAGAGTGGGGTTTTGCCTGATATAACAACTTATAGTTATGTTGTCGAGACTTTTGGGAAATTGGGTAAGCTTGGAAAGGTCTCTGATCTTCTAAAGGAGATGGAGTTGAGTGGGAAGTTACCTGATATATCATCGTATAATGTCTTATTAGAGGCTTATGCAAATGAAGGGTTGATTAAAGAGGCTATGGGGGTTTTTAGGCAGATGCAGGAGGCGGGTTGCATGCCTAATGCTAGTACGTACAGTATTCTGTTGAACTTGTATGGTAGTGAAGGTAGGTATGATGATGTTCGTGAGCTTTTCCTTGAGATGAAAGTGAGTAATACTGAGCCAGATGCCGGTACATATAATATCCTTATCCAGGTTTTTGGTGAGGGTGGATATTTCAAGGAAGTGGTGACTTTGTTCCATGATATGGTCGAGGAGAATGTTGAGCCGAATATGGAGACCTATGAAGGATTGATATTTGCTTGTGGAAAAGGGGGGTTACATCAAGATGCAAAAGAGATTTTACTTCATATGAATGAGAAAGGTTTGGTTCCAAGTCCTAAGGCCTACACTGGAGTTGTTGAAGCATATGGACAGGCTGCATTATATGAGGAAGCTATTGTTGCATTTAACACGATGAATGAGGTGGGAAGCCGACCTACTGTGGAAACTTACAATTCTCTGATTCACACATTTGCAAGAGGTGGACTTTACAAGGAGATTAATGCAATCTTGACTATGATGGGTGAGAGTGGAGTTCCAAGGAATACAAGTTCATTTAATGGTGTTATTGAAGGTTTCAGACATGGAGGGCAGTTTGAAGATGCTGTCAAGGCTTACATTGAGATGGACAAGGCAAGATGTGACCCGAATGAGCAGACACTTGAGGCAGTCTTGAGTGTTTACTGCTTTGCTGCTCTTGTTGACGAGGCAGAGGAGCAGTTTCAGGAAATAAAAGCTTCAGGAATACTACCGAGTATGATGTGTTACTGTACGATGATTGCAGTCTATGCAAAAAATGACAGGTTGAATGATGCCTATGAGTTGCTCGCTGGGATGCTCAATAATAGGACATCCAATATTCATCAAGTGATGGCTCAGATGATCAAGGGAGATTTTGATGATGACTCCAACTGGCAGATGGTGGAATATGTATTTGACAAACTAAAATCTGAAGGCTGTGCCTTTGGAATGAGATTTTATAATACTCTTCTAGAAGCACTTTGGTGGCTGGGCCAGAAGGAACGTGCAGCAAGGGTTCTAAGGGAAGCTACAAAGAGGGGACTTTTCCCCGAGCTATTTCGCAATAACAAACTGGTCTGGTCTCTTGACGTACATAGGATGTGGCCAGGCAGTACATGTACAGCAGTATCAGTTTGGCTCAATGATATGTTCAAGATGTACAAGGATGGGACAGATCTTCCTCAACTGGCAACTCTGGTTGTGGTCAGACGAGGAGATATGGAGAAGAGTTCTGCATCACAGGAATTTCCTGTCGCAAAGGTTGCCTATTCATTTCTAAAGGATAACTTACCATCATCGTCATCGTTTTCTTTCCCTAGTTGGAATAAGGGTCGCATTGTATGCCAGCGTACTCAACTCAAGCGATTATTGTCAGAGGTTGACCAATGTTCAGGCGAATCTGAGATACACGAAGTGATTGGCCTTATTAACACTACATTGCCTCTCCCTATGTCGAGGACATCTACTAGTAGTATGAGAAAAGATCAGCATAGTGGCAGTGACACAGATACTGTCCCTAGAACTAGAAGACAAAAAGAACTCATGTCTAGCACTGTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_26119.p1 GENE.S_Transcript_26119~~S_Transcript_26119.p1 ORF type:complete len:870 (+),score=160.14,PPR_2|PF13041.2|0.0028,PPR_2|PF13041.2|5.1e-08,PPR_2|PF13041.2|7.1e-13,PPR_2|PF13041.2|9.2e-12,PPR_2|PF13041.2|4.2e-12,PPR_2|PF13041.2|0.11,PPR_2|PF13041.2|1.7e-14,PPR_2|PF13041.2|5.2e-07,PPR_2|PF13041.2|7e-10,PPR_2|PF13041.2|0.014,PPR_2|PF13041.2|3.3e-05,PPR_2|PF13041.2|8e-06,PPR_2|PF13041.2|5.2e-07,PPR_2|PF13041.2|0.0016,PPR_2|PF13041.2|0.0084,PPR_2|PF13041.2|2.2e+03,PPR_2|PF13041.2|1.5,PPR|PF01535.16|19,PPR|PF01535.16|0.00011,PPR|PF01535.16|2.5e-08,PPR|PF01535.16|0.027,PPR|PF01535.16|5.5e-07,PPR|PF01535.16|0.23,PPR|PF01535.16|3.7e-07,PPR|PF01535.16|2e-05,PPR|PF01535.16|7.2e-05,PPR|PF01535.16|0.061,PPR|PF01535.16|4.6,PPR|PF01535.16|0.016,PPR|PF01535.16|0.072,PPR|PF01535.16|0.86,PPR|PF01535.16|0.011,PPR|PF01535.16|5.7e+02,PPR|PF01535.16|6.6,PPR_1|PF12854.3|0.0001,PPR_1|PF12854.3|6.3e-06,PPR_1|PF12854.3|0.36,PPR_1|PF12854.3|5.6e-07,PPR_1|PF12854.3|0.089,PPR_1|PF12854.3|3.5e-06,PPR_1|PF12854.3|2e-06,PPR_1|PF12854.3|0.009,PPR_1|PF12854.3|0.54,PPR_1|PF12854.3|95,PPR_1|PF12854.3|0.018,PPR_1|PF12854.3|12,PPR_1|PF12854.3|0.48,PPR_1|PF12854.3|0.00064,PPR_1|PF12854.3|3e+03,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|22,PPR_3|PF13812.2|4e-05,PPR_3|PF13812.2|0.00073,PPR_3|PF13812.2|0.00091,PPR_3|PF13812.2|4.7,PPR_3|PF13812.2|0.00023,PPR_3|PF13812.2|0.075,PPR_3|PF13812.2|0.0038,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|2.3e+03,PPR_3|PF13812.2|0.24,PPR_3|PF13812.2|0.57,PPR_3|PF13812.2|3.2e+02,PPR_3|PF13812.2|22,PPR_3|PF13812.2|9.9e+02,PPR_3|PF13812.2|80,ECSIT|PF06239.7|8.3e+02,ECSIT|PF06239.7|1.6e+03,ECSIT|PF06239.7|10,ECSIT|PF06239.7|0.25,ECSIT|PF06239.7|61,ECSIT|PF06239.7|56,TPR_14|PF13428.2|1.2e+04,TPR_14|PF13428.2|1.7e+02,TPR_14|PF13428.2|4.6e+03,TPR_14|PF13428.2|1.2e+02,TPR_14|PF13428.2|3.9e+03,TPR_14|PF13428.2|1.5e+03,TPR_14|PF13428.2|6.5e+03,TPR_14|PF13428.2|1.8e+02,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|0.62,RPM2|PF08579.7|1.7e+02,RPM2|PF08579.7|0.84,RPM2|PF08579.7|7.8e+02,RPM2|PF08579.7|1.1e+03,RPM2|PF08579.7|5.1,RPM2|PF08579.7|1.3e+04,RPM2|PF08579.7|4.3e+03 S_Transcript_26119:900-3509(+)
MLKTLTFSLSISSQSILSPKPNNPLIPNSFSHKKFAFLSKPLLVSSEFKVKAKPKDLILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDSFKNKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIIIGVLGREGLLEKCHEVFDEMSVHNVPRSVFSYTALINAYGRNGKYEIALELLSRMKRERVVPSILTYNTVINSCARGGLDWEELLGLFAEMRHEGIQPDIVTYNTLLSACASRGLGDEAEMVFRTMNESGVLPDITTYSYVVETFGKLGKLGKVSDLLKEMELSGKLPDISSYNVLLEAYANEGLIKEAMGVFRQMQEAGCMPNASTYSILLNLYGSEGRYDDVRELFLEMKVSNTEPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHQDAKEILLHMNEKGLVPSPKAYTGVVEAYGQAALYEEAIVAFNTMNEVGSRPTVETYNSLIHTFARGGLYKEINAILTMMGESGVPRNTSSFNGVIEGFRHGGQFEDAVKAYIEMDKARCDPNEQTLEAVLSVYCFAALVDEAEEQFQEIKASGILPSMMCYCTMIAVYAKNDRLNDAYELLAGMLNNRTSNIHQVMAQMIKGDFDDDSNWQMVEYVFDKLKSEGCAFGMRFYNTLLEALWWLGQKERAARVLREATKRGLFPELFRNNKLVWSLDVHRMWPGSTCTAVSVWLNDMFKMYKDGTDLPQLATLVVVRRGDMEKSSASQEFPVAKVAYSFLKDNLPSSSSFSFPSWNKGRIVCQRTQLKRLLSEVDQCSGESEIHEVIGLINTTLPLPMSRTSTSSMRKDQHSGSDTDTVPRTRRQKELMSSTV*

Click here to download the sequence:
Link to NCBI Protein BLAST