Transcript Information: S_Transcript_261397.p1


Annotated TAIR IDAT3G03550.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:850391-851461 | Reverse length=356
E-Value3.8E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.603843917264
Replicate 23.7920419551979
Replicate 32.1132301762459
Condition 2: 8 Hour
Replicate 11.5549763772909
Replicate 20.69912026999146
Replicate 31.5542805545299
Condition 3: 24 Hour
Replicate 12.3892841317837
Replicate 22.5968950764565
Replicate 31.9704722191497


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_261397.p1 GENE.S_Transcript_261397~~S_Transcript_261397.p1 ORF type:complete len:192 (+),score=31.85,zf-RING_2|PF13639.2|9.8e+03,zf-RING_2|PF13639.2|1.2e-15,zf-RING_2|PF13639.2|4.2e+03,zf-RING_11|PF17123.1|2.7e-12,zf-RING_11|PF17123.1|5.3e+02,zf-rbx1|PF12678.3|2e-08,zf-rbx1|PF12678.3|7e+03,zf-C3HC4_2|PF13923.2|1.3e+04,zf-C3HC4_2|PF13923.2|1.6e-07,zf-C3HC4_2|PF13923.2|3.3e+03,zf-C3HC4|PF00097.21|2.1e-07,zf-C3HC4|PF00097.21|1.6e+04 S_Transcript_261397:122-697(+)
ATGGCTGTTGCACTGAGGCTTCTTTCTGAAGTCAACACAACATCAGTACCTGCAGAGCATGAAGATTCCACGGCTCTTCGATCTGATTATGTAGTCATCCTTGCTGCTCTCTTTTGTGCTCTTATCTGTGCAATTGGCCTTGCAATGGTAGCTCGATGTTTCTGTCTCCACCGCCGTCTTGAGTTTTTCCTAACGACTCGAACCCGCCCTGCACCATCACCCCCTCCTTCAGGTCTCAGCAAGAAGACCCTGCAGTTACTGCCAACGAAACATGTCAATGGAACAGTCAGTGCCGACAAACAGATTGATTGTGCCATATGTCTGACAGAGTTTTCTGATGGAGATGTCATGAGAATTCTTCCGCGTTGTGGTCATGTCTTTCATGTAACCTGCATTGACACTTGGCTTTTGTCACACTCGTCTTGTCCATCTTGTCGACAGTTGGTTCTAGTGGTTGCTCGTTGTCAGCACTGTGGTGGACTCTCTGCGAGCCACAGCCTCCCTGGTGCTGAGAATGGTGACAGAGAGAATGATGTAATCTCGAGTCAAGATAATGATCATAGGTTTTTACCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_261397.p1 GENE.S_Transcript_261397~~S_Transcript_261397.p1 ORF type:complete len:192 (+),score=31.85,zf-RING_2|PF13639.2|9.8e+03,zf-RING_2|PF13639.2|1.2e-15,zf-RING_2|PF13639.2|4.2e+03,zf-RING_11|PF17123.1|2.7e-12,zf-RING_11|PF17123.1|5.3e+02,zf-rbx1|PF12678.3|2e-08,zf-rbx1|PF12678.3|7e+03,zf-C3HC4_2|PF13923.2|1.3e+04,zf-C3HC4_2|PF13923.2|1.6e-07,zf-C3HC4_2|PF13923.2|3.3e+03,zf-C3HC4|PF00097.21|2.1e-07,zf-C3HC4|PF00097.21|1.6e+04 S_Transcript_261397:122-697(+)
MAVALRLLSEVNTTSVPAEHEDSTALRSDYVVILAALFCALICAIGLAMVARCFCLHRRLEFFLTTRTRPAPSPPPSGLSKKTLQLLPTKHVNGTVSADKQIDCAICLTEFSDGDVMRILPRCGHVFHVTCIDTWLLSHSSCPSCRQLVLVVARCQHCGGLSASHSLPGAENGDRENDVISSQDNDHRFLP*

Click here to download the sequence:
Link to NCBI Protein BLAST