Transcript Information: S_Transcript_2616.p1


Annotated TAIR IDAT1G55140.1
Annotated Gene NameRibonuclease III family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:20572503-20574332 | Reverse length=237
E-Value9.9E-78
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 141.448984682379
Replicate 237.405304134867
Replicate 345.788862000663
Condition 2: 8 Hour
Replicate 161.524976662073
Replicate 272.387073472219
Replicate 356.229735923485
Condition 3: 24 Hour
Replicate 135.905957921322
Replicate 234.12596915519
Replicate 337.543158051294


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_2616.p1 GENE.S_Transcript_2616~~S_Transcript_2616.p1 ORF type:5prime_partial len:174 (+),score=26.20,Ribonuclease_3|PF00636.22|3.6e-11 S_Transcript_2616:1-522(+)
CAAACATATATGGGTTATGAAAGGTGGTTGCCGAGCCCGCCGAAGGTGGACAAGCCTCGGTCTTCGCACAATGCAGCGGCTTTAGCATACATTGGAGATTGTATATATGAGTTATATGCTCGAAGGCACTTTTTAGCACCCGCACTGAATATTGAAGAATACAATGACCGTGTGATGGCAGTAGTGCGTTGTGAGGCACAGGATGCACTACTTCAGAAACTTCTTAACGAGAACTTTTTGTCTGGAGAAGAAAGGGATGTTCTTCGATGGGGAAAGAACATTACTTCAGCTAAAACACGGACCACAAAACGTGCTGGAGTTGCAGTTTATAATAGAGCCTCTTCTTTGGAAACACTGATTGGTTACCTTTACCTCACCAACCCACCTCGCTTGGAGGAGATGATGTCAAGGTTAGGATTTTCAATTGGCGTCTCAAACCAATCAATTATTGAGGATCTGAACATGGAGTTACATGATATGAAGCAAAAAAAATCGAAAGATAAGTTGGCTCTCCTAAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_2616.p1 GENE.S_Transcript_2616~~S_Transcript_2616.p1 ORF type:5prime_partial len:174 (+),score=26.20,Ribonuclease_3|PF00636.22|3.6e-11 S_Transcript_2616:1-522(+)
QTYMGYERWLPSPPKVDKPRSSHNAAALAYIGDCIYELYARRHFLAPALNIEEYNDRVMAVVRCEAQDALLQKLLNENFLSGEERDVLRWGKNITSAKTRTTKRAGVAVYNRASSLETLIGYLYLTNPPRLEEMMSRLGFSIGVSNQSIIEDLNMELHDMKQKKSKDKLALLN*

Click here to download the sequence:
Link to NCBI Protein BLAST