Transcript Information: S_Transcript_261635.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value3E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.55831471122756
Replicate 20.30857048332189
Replicate 30.51588072961121
Condition 2: 8 Hour
Replicate 11.1930288289305
Replicate 21.4080184458569
Replicate 30.74530935681753
Condition 3: 24 Hour
Replicate 10.61104569204459
Replicate 20.95092915704954
Replicate 30.52913379870873


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_261635.p1 GENE.S_Transcript_261635~~S_Transcript_261635.p1 ORF type:5prime_partial len:143 (+),score=7.64,RVT_1|PF00078.23|1.3e-09 S_Transcript_261635:3-431(+)
GGTTTTCTAGATTGGTTGCATGTTTGGAAGGGGTTTGGTGAGAGGTGGAGCCAGTGGATTAGGGGTTGTTTATCTAACACCTTCTTCTCGATTTTGGTGAATGGGGGTCCTAGGGAATGGTTTACGTCTTCCCAAGGGCTGCGACAAGGGGACCCCTTGTCTCCCTTCCTATTTACCCTTGTGGTGGACGTCTTGAGCTGGTTGTTGGATAGAGCTGTGGATAGGGGCGTAGTGATGATACCATCCTCTTTCTCAATGCCGATTATGAGCAATTTTGTTAGGTGCTCGCAATTTTACAACTGTTTGAGTTTGTTCCTGAGATGCGTGTTAATCTTAGTAAGTGTAGTTTGGTCGGGATTAATGTGGGTCAGGAGGAGCTTGTGGCTTTTGCAGAGGTTGTGGGGTGTCAAATTCAGAGCTGGCCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_261635.p1 GENE.S_Transcript_261635~~S_Transcript_261635.p1 ORF type:5prime_partial len:143 (+),score=7.64,RVT_1|PF00078.23|1.3e-09 S_Transcript_261635:3-431(+)
GFLDWLHVWKGFGERWSQWIRGCLSNTFFSILVNGGPREWFTSSQGLRQGDPLSPFLFTLVVDVLSWLLDRAVDRGVVMIPSSFSMPIMSNFVRCSQFYNCLSLFLRCVLILVSVVWSGLMWVRRSLWLLQRLWGVKFRAGL*

Click here to download the sequence:
Link to NCBI Protein BLAST