Transcript Information: S_Transcript_261810.p1


Annotated TAIR IDAT2G19380.1
Annotated Gene NameRNA recognition motif (RRM)-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:8383856-8386604 | Forward length=613
E-Value1E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.946221587735
Replicate 29.5284026880784
Replicate 37.6805224821164
Condition 2: 8 Hour
Replicate 19.0454740419716
Replicate 28.0515650631407
Replicate 39.4250020258529
Condition 3: 24 Hour
Replicate 18.1988508730765
Replicate 27.0496688964988
Replicate 37.5860647696622


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_261810.p1 GENE.S_Transcript_261810~~S_Transcript_261810.p1 ORF type:complete len:389 (-),score=100.96,zf-met|PF12874.3|8e-07,zf-met|PF12874.3|4.6e-09,zf-met|PF12874.3|1.9e-08,zf-met|PF12874.3|0.0012,zf-C2H2_jaz|PF12171.4|0.073,zf-C2H2_jaz|PF12171.4|0.00015,zf-C2H2_jaz|PF12171.4|1.2e-05,zf-C2H2_jaz|PF12171.4|4.4,zf-C2H2_2|PF12756.3|0.15,zf-C2H2_2|PF12756.3|0.032,zf-C2H2_2|PF12756.3|0.032,zf-C2H2_2|PF12756.3|13,AKAP95|PF04988.8|1,AKAP95|PF04988.8|2.7,AKAP95|PF04988.8|0.73,AKAP95|PF04988.8|9 S_Transcript_261810:2-994(-)
ATGGAAAACACGAGTGACCAAGAGATGGCTTCAAAAGAAAGCAAGGACTCACAGAAGAAGTGGTATTGCTCCTTATGTGTAGTGTCGACAACATCAGAGGGAGCTCTAAATCACCATTTTCAAGGGAAAAAGCACAAAGCAAAGGAGGCAAATTTGAGAGCTAATGATACAACCAGCAGCATGAGCATTAATGGTTATTCCACCGAGAGCTCCCAACAACTCCTGGATAAAGAGAAATCCATAGGTCCCAACAAATGGCGCTGCTCACTTTGTCAAGTGTCCGTTTCTTCTGAGATGCATCTAAGAGCCCATCTCCAAGGAAGAAAACACAAAGCCAAGGAAGCAAAACTCGGACTAGAACAAAATGTTAGTAACTTGGATTGTAGTTCCATTGAGAAGTCTCAGGAAAATGTTCAGGCTGATGACAGTGAAGGTGTGAAAACTGAGGCCTCGAAGAAGTGGTACTGCCCATTGTGCCAAGTATCAGCTCTGTCAGAGAAAAATCTGAACGACCATTTTCAAGGGAAAAAGCACAAGGCCAAGTCAGCTGAGAAAGTGTTGGAACTTGCTGAGCTGACGAAGGACAAGAGTGCCGGAAATGATGTGGGAACCGACTTTGCAGCTACCAAGCCTGGGAAATGCGAAGAAAAGCAAGAAGCGACCTGCAATGCAGCCATGGGGAAGATTGAATCGGAGAGGAAGAGCAGCTCAAGCCTTGAAGAAACTTCTGACACTAAAGAGGTGGAATTTGAACAGATCACAGGAAATGAACCTGAAACCGACACAGAAAAATCTGGGGATAGTGACCAAGTAAACAAAGATGAGATGTGTGACAACTTGAAGTATTGGCACTGCCAGATGTGCAATGAAAGTACATGTAATGAAGCGGCAATGGCAGCTCATAGGAAGGGTAATAAGCACAAGACACTCCTGCATAAAAATGGCGGTGGTGTCATTATTGTGGCGAGGGTTCCAAAGGAAGCTGTAGTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_261810.p1 GENE.S_Transcript_261810~~S_Transcript_261810.p1 ORF type:complete len:389 (-),score=100.96,zf-met|PF12874.3|8e-07,zf-met|PF12874.3|4.6e-09,zf-met|PF12874.3|1.9e-08,zf-met|PF12874.3|0.0012,zf-C2H2_jaz|PF12171.4|0.073,zf-C2H2_jaz|PF12171.4|0.00015,zf-C2H2_jaz|PF12171.4|1.2e-05,zf-C2H2_jaz|PF12171.4|4.4,zf-C2H2_2|PF12756.3|0.15,zf-C2H2_2|PF12756.3|0.032,zf-C2H2_2|PF12756.3|0.032,zf-C2H2_2|PF12756.3|13,AKAP95|PF04988.8|1,AKAP95|PF04988.8|2.7,AKAP95|PF04988.8|0.73,AKAP95|PF04988.8|9 S_Transcript_261810:2-994(-)
MENTSDQEMASKESKDSQKKWYCSLCVVSTTSEGALNHHFQGKKHKAKEANLRANDTTSSMSINGYSTESSQQLLDKEKSIGPNKWRCSLCQVSVSSEMHLRAHLQGRKHKAKEAKLGLEQNVSNLDCSSIEKSQENVQADDSEGVKTEASKKWYCPLCQVSALSEKNLNDHFQGKKHKAKSAEKVLELAELTKDKSAGNDVGTDFAATKPGKCEEKQEATCNAAMGKIESERKSSSSLEETSDTKEVEFEQITGNEPETDTEKSGDSDQVNKDEMCDNLKYWHCQMCNESTCNEAAMAAHRKGNKHKTLLHKNGGGVIIVARVPKEAVV*

Click here to download the sequence:
Link to NCBI Protein BLAST