Transcript Information: S_Transcript_262022.p1


Annotated TAIR IDATMG00820.1
Annotated Gene NameReverse transcriptase (RNA-dependent DNA polymerase)
Annotated Gene Symbol(s)ORF170
Annotation TypeHomolog
Chromosome PositionchrM:228573-229085 | Reverse length=170
E-Value5E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.27638794605302
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_262022.p1 GENE.S_Transcript_262022~~S_Transcript_262022.p1 ORF type:5prime_partial len:82 (+),score=9.89,RVT_2|PF07727.10|1.9e-24 S_Transcript_262022:3-248(+)
CAATTTGAAAGAAACCAAGTGTGGCATTTGGTTCCTAGACCATTGGAACACAATGTGATAGGAACCAAATGGATTCTTCGAAACAAGCTGGATGAAGAGGGCTTTGTTGTTAGAAACAAAGCAAGACTAGTGGCTCAAGGGTATTTCCAAGAAGAAGGAATTGATTTTGATGAATCATTTGCACCGGTTGCTCGCATAGAGGCAATAAGGTTATTCCGATTCGGATTTCGCAGGGTACTCAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_262022.p1 GENE.S_Transcript_262022~~S_Transcript_262022.p1 ORF type:5prime_partial len:82 (+),score=9.89,RVT_2|PF07727.10|1.9e-24 S_Transcript_262022:3-248(+)
QFERNQVWHLVPRPLEHNVIGTKWILRNKLDEEGFVVRNKARLVAQGYFQEEGIDFDESFAPVARIEAIRLFRFGFRRVLS*

Click here to download the sequence:
Link to NCBI Protein BLAST