Transcript Information: S_Transcript_262035.p1


Annotated TAIR IDAT5G15170.1
Annotated Gene Nametyrosyl-DNA phosphodiesterase-related
Annotated Gene Symbol(s)TDP1
Annotation TypeOrtholog
Chromosome Positionchr5:4926300-4929307 | Reverse length=605
E-Value3.1E-136
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.77299173712142
Replicate 21.6478432034658
Replicate 30.84178463452119
Condition 2: 8 Hour
Replicate 12.2121774187897
Replicate 21.8565849493549
Replicate 33.0956625152463
Condition 3: 24 Hour
Replicate 11.6315680615382
Replicate 21.0344478312856
Replicate 32.1977715041802


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_262035.p1 GENE.S_Transcript_262035~~S_Transcript_262035.p1 ORF type:3prime_partial len:241 (-),score=51.90,Tyr-DNA_phospho|PF06087.8|6.4e-15,Tyr-DNA_phospho|PF06087.8|1.7e-48 S_Transcript_262035:2-721(-)
ATGCTTCTTGTGTACCCTCGGGGAGTGAGGGTCATTGTTCACACAGCAAATTTGATATATGTTGACTGGAATAATAAAAGTCAAGGATTGTGGATGCAAGATTTTCCTTGGAAAGACCAGAAAGAGGGAAGCAAAGGATGTGAATTTGAAACTGACCTTGTTGATTACCTACAGGCTCTAAAGGTCAGATTGATTGCATCAGTTCCTGGATATCATTCAGGGTCGAATTTAAAGAAATGGGGTCATATGAAACTACGTTCCATTCTGGAGCGGTGTACTTTTGACAAAGAATTTAAGAAATCGCCTCTTGCTTATCAGTTTTCATCTCTCGGTTCTCTGGATGAGAAGTGGATGGCTGAACTAAGATCTTCAATGTCATCTGGCTTGTTGGCTGATAAGACGCCCTTGGGTTTAGGAGAGCCATTGATAATATGGCCTACAGTGGAAGATGTCAGATGGTCATTGGAGGGATATGCAGCTGGAAATGCCATCCCTAGTCCGGTAAAAAATGTCAAGAAGGAATTTTTGAAGAAGTACTGGGCAAAGTGGAAGGCCACCCACACTGGCCGATGCCGTGCAATGCCTCATATAAAGACATTTGTTCGCTATAATGGCCAAAATCTTGCTTGGTTCTTGCTTACATCAGCAAATCTCAGCAAAGCTGCCTGGGGAGCCCTTCAAAAGAACAATTCACAGTTGATGATTCGTTCCTATGAGCTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_262035.p1 GENE.S_Transcript_262035~~S_Transcript_262035.p1 ORF type:3prime_partial len:241 (-),score=51.90,Tyr-DNA_phospho|PF06087.8|6.4e-15,Tyr-DNA_phospho|PF06087.8|1.7e-48 S_Transcript_262035:2-721(-)
MLLVYPRGVRVIVHTANLIYVDWNNKSQGLWMQDFPWKDQKEGSKGCEFETDLVDYLQALKVRLIASVPGYHSGSNLKKWGHMKLRSILERCTFDKEFKKSPLAYQFSSLGSLDEKWMAELRSSMSSGLLADKTPLGLGEPLIIWPTVEDVRWSLEGYAAGNAIPSPVKNVKKEFLKKYWAKWKATHTGRCRAMPHIKTFVRYNGQNLAWFLLTSANLSKAAWGALQKNNSQLMIRSYEL

Click here to download the sequence:
Link to NCBI Protein BLAST