Transcript Information: S_Transcript_262202.p1


Annotated TAIR IDAT5G57450.1
Annotated Gene NameHomolog of X-ray repair cross complementing 3 (XRCC3)
Annotated Gene Symbol(s)XRCC3, ATXRCC3
Annotation TypeOrtholog
Chromosome Positionchr5:23274008-23274922 | Reverse length=304
E-Value2.2E-115
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.474404500564
Replicate 21.1000836898484
Replicate 31.5837252592566
Condition 2: 8 Hour
Replicate 11.8312662045184
Replicate 22.7267627150913
Replicate 31.889493416508
Condition 3: 24 Hour
Replicate 10.66563356896547
Replicate 21.2556128297145
Replicate 30.69867159016942


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_262202.p1 GENE.S_Transcript_262202~~S_Transcript_262202.p1 ORF type:5prime_partial len:361 (+),score=44.86,Rad51|PF08423.7|1.4e-27,Rad51|PF08423.7|33,AAA_25|PF13481.2|5.4e-09 S_Transcript_262202:3-1085(+)
GGCAATGACCAAACCCTTTATGCACCAAAAAAAAATGACCAAACCCTTTTCCTCAAACAAAATGTTGCCTGCAAACAAACACAATACTTTAGCCGTCCCTTTACCACCACAAGTACAACCCTTCCAATGAAACCCTCCAACCTGCTTGACACCCTCAAACAGCAACCCATCACCACCCAAAAACTAACCCTGAATTGCCCAATCCTCGACCAATTCCTAGCCGGTGGTATTCCCTGCAAATCCATAACTGAACTCGTTGCCGAAAGCGGCACCGGAAAAACCCAACTTTGCCTTCAACTCCTTCTCAATGCCCAGTTACCCATCTCACTTGGTGGCCTTTCTTCATCTTCTCTTTACCTTCACTCAGAATTCCCCTTCCCAAACCGCCGTTTAAGGCAACTCTCACACTCTTTCCTCAAATCCAACATTGCCCATTTCAACCCCACTTCATATGACCCCTTAGATAAGGTCTTAGTCCATGCTGTTCAAGATGCACACCACCTGTTCGACGTTTTGCTCAAGTTGGATTCTTTTCTTGTTAGGAGGAATTTCAACACCCATTGGCCTGTTAAGTTGATTGTGATTGATTCTATAGCTGCCCTTTTCAGGTCTGAGTTTGATAACACCCCCGCTGATATGAAGAAGCGATCGTCGTTTTTCTTTAAGATTTCGGGGAGGTTGAGAGCTCTGGCAGAAAAGTTTGGGTTGGCGGTTGTGATAACTAATCAAGTGGTTGATTTTGTGGGTAGTAATGATGGGATTAATGGGTTGAGGATTGGGAATTTGGATTGCTTGTTTACTTCTGGGAGGCGCGTTTGTCCCGCTTTAGGATTGGCATGGGCTAATTGTGTTAATACAAGGTTGTTTATGTCGAGGAGTGAGGAGGTTGTTGTAGGTGAGACGAGTGGGTTGGTTGAGGAAGATGGAAGTGGTTCGGTTTGCGTAAGGACTAGGAGGCACATTCATGTTGTTTTCGCGCCTCATTTGCCGCCATCTTCTTGTGAGTTTACAATACTAAGAGAAGGGATCTTTGGAGTTGAAAGTAGTAATGATTGGTTTACCTCTAACTCGAGGGGTTATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_262202.p1 GENE.S_Transcript_262202~~S_Transcript_262202.p1 ORF type:5prime_partial len:361 (+),score=44.86,Rad51|PF08423.7|1.4e-27,Rad51|PF08423.7|33,AAA_25|PF13481.2|5.4e-09 S_Transcript_262202:3-1085(+)
GNDQTLYAPKKNDQTLFLKQNVACKQTQYFSRPFTTTSTTLPMKPSNLLDTLKQQPITTQKLTLNCPILDQFLAGGIPCKSITELVAESGTGKTQLCLQLLLNAQLPISLGGLSSSSLYLHSEFPFPNRRLRQLSHSFLKSNIAHFNPTSYDPLDKVLVHAVQDAHHLFDVLLKLDSFLVRRNFNTHWPVKLIVIDSIAALFRSEFDNTPADMKKRSSFFFKISGRLRALAEKFGLAVVITNQVVDFVGSNDGINGLRIGNLDCLFTSGRRVCPALGLAWANCVNTRLFMSRSEEVVVGETSGLVEEDGSGSVCVRTRRHIHVVFAPHLPPSSCEFTILREGIFGVESSNDWFTSNSRGY*

Click here to download the sequence:
Link to NCBI Protein BLAST