Transcript Information: S_Transcript_262244.p1


Annotated TAIR IDAT1G09890.1
Annotated Gene NameRhamnogalacturonate lyase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:3214237-3217386 | Reverse length=617
E-Value2.5E-149
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3532034526363
Replicate 20.97225852287353
Replicate 32.0005679819499
Condition 2: 8 Hour
Replicate 10.7951840457236
Replicate 20.30334710019968
Replicate 30.93934243682969
Condition 3: 24 Hour
Replicate 11.1107567876573
Replicate 20.99874423895768
Replicate 31.2824768341585


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_262244.p1 GENE.S_Transcript_262244~~S_Transcript_262244.p1 ORF type:internal len:295 (+),score=49.93,fn3_3|PF14686.2|7.3e+03,fn3_3|PF14686.2|1.3e-28,CBM-like|PF14683.2|2.6e+03,CBM-like|PF14683.2|6.8e-06 S_Transcript_262244:1-882(+)
CCAGAAAGATGCAAAGTTTTGGCTTATCCTGAAGCTGTTCTGCTTACTAACCCAATCGAGGAAGAATTCAAAGGAGAGGTGGATGACAAATACCAATATTCATGTGAAAACAAGGACCTTCAAGTCCAAGGATGGATATGCACTGATCCACCCACCGGGTTCTGGCAGATCACGCCCAGCGACGAGTTCCGAACTGGTGGACCCCTCAAGCAAAATCTCACCTCTCATGTCGGCCCCGTTAACCTTGCTATGTTCATCAGTGCTCATTATTCCGGGCAGGATATGGTGGTTAAGTTTGCAGAAGGAGAGGAGTGGAAAAGAGTGTTAGGTCCAGTATTTATGTACTTGAATAGTGTGCCCAAGGAAGTTGATTGGCATTTGTTGTGGTATGATGCTAAGGAGCAGATGTTGGTTGAAAAAGAAAGTTGGCCTTACTCTTTTCCAGCCTCAGAGGATTATCCAAAATTCGAAGAACGGGGGAGCCTCGTTGGTCGACTGCTAGTCCATGACAAGTACTCTGATGATGATAATTCTATCCCAGCTGAAGGAGCATATGTTGGGTTAGCTTCCCCAAATGAAGCTAATTCCTGGCAACTACAAAGCAAGGGTTACCAGTTCTGGACAAGGGTAGATGAGGATGGCTTTTTCGCCATTGACAATATAAGAGCTAATGACTATAAACTTTATGCCTGGGTTCCGGGCTTCATAGGAGACTATGTATGCGACAAGATCATCTCCGTAACTTCAGGTTGTGAGATTGATATGGGTGAGCTTGTATATGAACCGCCAAGAGATGGACCGACCTTGTGGGAGATTGGTATCCCTGATCGGACTGCTCGAGAATTTTACATCCCTGATCCTGATCCTGAGTATGTCAATAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_262244.p1 GENE.S_Transcript_262244~~S_Transcript_262244.p1 ORF type:internal len:295 (+),score=49.93,fn3_3|PF14686.2|7.3e+03,fn3_3|PF14686.2|1.3e-28,CBM-like|PF14683.2|2.6e+03,CBM-like|PF14683.2|6.8e-06 S_Transcript_262244:1-882(+)
PERCKVLAYPEAVLLTNPIEEEFKGEVDDKYQYSCENKDLQVQGWICTDPPTGFWQITPSDEFRTGGPLKQNLTSHVGPVNLAMFISAHYSGQDMVVKFAEGEEWKRVLGPVFMYLNSVPKEVDWHLLWYDAKEQMLVEKESWPYSFPASEDYPKFEERGSLVGRLLVHDKYSDDDNSIPAEGAYVGLASPNEANSWQLQSKGYQFWTRVDEDGFFAIDNIRANDYKLYAWVPGFIGDYVCDKIISVTSGCEIDMGELVYEPPRDGPTLWEIGIPDRTAREFYIPDPDPEYVNK

Click here to download the sequence:
Link to NCBI Protein BLAST