Transcript Information: S_Transcript_26271.p2


Annotated TAIR IDAT5G05800.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1743234-1744751 | Reverse length=449
E-Value6E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.8945773823107
Replicate 27.5428340367572
Replicate 36.3840240289387
Condition 2: 8 Hour
Replicate 17.0173292923899
Replicate 26.5012209722282
Replicate 36.7409090716608
Condition 3: 24 Hour
Replicate 16.6281484095393
Replicate 25.811233737525
Replicate 35.820471785796


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_26271.p2 GENE.S_Transcript_26271~~S_Transcript_26271.p2 ORF type:complete len:234 (+),score=42.55,Myb_DNA-bind_3|PF12776.3|4.3e-17 S_Transcript_26271:85-786(+)
ATGGCAACAAATCGAAAAAAGAATAAAGATGATATTGAAGGTGGTGGTGCAATGGGGAGACAAGATAATGGAAGAGTTAAGTGGTCAAAAGAATTACTCCACATTCTTTATGATCTTTGTATTCAATATACTGAAAAAAATAAAGGAAAACGTGGCGAGGTTATTTCTCAAAGAATAGAATGGAAAAAAGTTGTGCCAGAATTTGAGAAAAAGATTAAATTATCATGGGACAAACCAAGACTTAAAAACAAATTAGACAACTATAAGTCATCTTGGAGTCTTTGGAAGCAATTGAAAGGGAAGGAGACGGGATTAGAGTGGGATGCTGAAAAAGGAACACTAAGTGCTAGTGATGAATGGTGGGACTCAAAGATTAAGGAAAATCCCAAATTCAAGGAATTTCGAAATGAGGGCATTGAACCTGAGCTTGAACATAAGTTGAATGCTATATTCCTTTGTAGTGCTACAGGGGCGGCTAAGTACACTCCAGTGGCCGAAAACCCACAAGAGCATCAACATCAATTTCATGATAATGATGAAGTTTACATTCCCATTCCACCCATCCAACCACTTGATATGAATGATAGTTATAGTGGTAATAATTTTAATGTAAGGGCTACATGGGATGAAATGTTAAATGCCCAATCAGATGAAAACCTTACACCTACCTCTAACCTTTCTCCATTTACTGAAGATACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_26271.p2 GENE.S_Transcript_26271~~S_Transcript_26271.p2 ORF type:complete len:234 (+),score=42.55,Myb_DNA-bind_3|PF12776.3|4.3e-17 S_Transcript_26271:85-786(+)
MATNRKKNKDDIEGGGAMGRQDNGRVKWSKELLHILYDLCIQYTEKNKGKRGEVISQRIEWKKVVPEFEKKIKLSWDKPRLKNKLDNYKSSWSLWKQLKGKETGLEWDAEKGTLSASDEWWDSKIKENPKFKEFRNEGIEPELEHKLNAIFLCSATGAAKYTPVAENPQEHQHQFHDNDEVYIPIPPIQPLDMNDSYSGNNFNVRATWDEMLNAQSDENLTPTSNLSPFTEDT*

Click here to download the sequence:
Link to NCBI Protein BLAST