Transcript Information: S_Transcript_263130.p1


Annotated TAIR IDAT2G41120.1
Annotated Gene Nameunknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF309 (InterPro:IPR005500); Has 349 Blast hits to 349 proteins in 112 species: Archae - 2; Bacteria - 189; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:17141454-17142419 | Reverse length=261
E-Value3.9E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8248915132695
Replicate 24.6647040778746
Replicate 33.4777730900504
Condition 2: 8 Hour
Replicate 11.9497499718522
Replicate 22.556782701683
Replicate 33.410535616797
Condition 3: 24 Hour
Replicate 11.9972464905686
Replicate 22.4606423997177
Replicate 31.2971337122631


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_263130.p1 GENE.S_Transcript_263130~~S_Transcript_263130.p1 ORF type:internal len:175 (-),score=27.18,DUF309|PF03745.10|7.4e-22 S_Transcript_263130:2-523(-)
GGTACACGAAATTCTGGTGTTGTCTCTTTCAACAACTCCTCAAATTTGGTAAAACACATTGGCAGTCGCAGCAGGGAAAAATGCCGCCTGCTCCTTTGGAGAGCCTATCGTTCCATCTCGTATAGGCAGGATGAAGAGGAAGAGTCGAGCCATTATCTCTCGCCCTCTGATCGCTTGTTGAGGTTTGAAGAGGCAGTGAAGCTGTTCAACAAGAGCGAATACTATGCTTGCCACGACTTGCTCGAGTCTCTCTGGTATGAATCAAATGACCCTCTTCGTACTCTTCTTCACGCCCTTCTTCAGTGTGCTGTTGCCTTCCATCACCTCTTCAACCAGAATCACAAGGGCGCGATGATGGAGATGGGTGAGGGTGTGTGCAAGCTCCGAAAGCTGAATTTCGAAGCTGGACCTTTTTATCAGTTTGAGCAGGAGATGTCTGCTGTCCTCAATTTTATCTACCAGACTCAGTTGGAGCTTGCTGCCTGTGAGTTACTGCCTCCGTCCTACTTTCTTTTTGTATAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_263130.p1 GENE.S_Transcript_263130~~S_Transcript_263130.p1 ORF type:internal len:175 (-),score=27.18,DUF309|PF03745.10|7.4e-22 S_Transcript_263130:2-523(-)
GTRNSGVVSFNNSSNLVKHIGSRSREKCRLLLWRAYRSISYRQDEEEESSHYLSPSDRLLRFEEAVKLFNKSEYYACHDLLESLWYESNDPLRTLLHALLQCAVAFHHLFNQNHKGAMMEMGEGVCKLRKLNFEAGPFYQFEQEMSAVLNFIYQTQLELAACELLPPSYFLFVY

Click here to download the sequence:
Link to NCBI Protein BLAST