Transcript Information: S_Transcript_263180.p1


Annotated TAIR IDAT2G21440.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:9173712-9179065 | Reverse length=1003
E-Value8E-95
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1155150218339
Replicate 22.4661002299817
Replicate 32.3191464536264
Condition 2: 8 Hour
Replicate 13.1924237001696
Replicate 23.0811528066689
Replicate 32.0422368962856
Condition 3: 24 Hour
Replicate 12.2237306547311
Replicate 22.3975688893142
Replicate 32.3661398942923


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_263180.p1 GENE.S_Transcript_263180~~S_Transcript_263180.p1 ORF type:internal len:501 (-),score=140.88,RRM_1|PF00076.18|0.025,RRM_1|PF00076.18|52,RRM_1|PF00076.18|8.4e-16,RRM_1|PF00076.18|0.00015,RRM_6|PF14259.2|0.27,RRM_6|PF14259.2|1.1e+04,RRM_6|PF14259.2|1.3e-09,RRM_6|PF14259.2|0.013,RRM_5|PF13893.2|0.02,RRM_5|PF13893.2|1.9e+03,RRM_5|PF13893.2|2.9e-06,RRM_5|PF13893.2|3.6e+03,RRM_5|PF13893.2|5.2e+02 S_Transcript_263180:2-1501(-)
TTTGTTCAATTTGCTACTGCGGAGGATGCTGATCGTTCCATTGAAATGAAAAATGGTTCATCTGTTGGAGGACGGAAAGTAGTGGTGAAACATGCTGCACATCGTGCTCCTTTAGAGCAGCGTCGACCGAAGCCAAATCAAGCTGATTCAAATGAAATTGATAAGACAACAGATGAGAAGGAGGGGGCCCCACAACCTGCTCCTGTAAAACATGAAAAGCCGCCAACTGAGCAGCAAATAGTAGGTAAATCCATTCAGCCTGTAAAGAGATCAAAGAAACCTAGTATTGGTGTAGCTGATGAAGGCAGTGCTTCAGAAAAACAAAGGGTGGCAAGGACTGTGATATTTGGAGGGCTGTTGAACTCTGAAATGGCAGATGAGGTCCTCCGTCGCGCCAAAGAGGTTGATGGAGTCTGTTCTGTAACATACCCACTTCCAAAGCAAGAGCTAGAGCACCATGGTCTTGCCCAAGATGGATGCAGAATGGAAGCTGCATCCGTACTTTATGCTAGTATTAGATCTGCACGTGCTTCTGTTGCTGCCCTGCACCAAAAAGAAGTGAATGGAGGATCAGTATGGGCACGCCAGCTTGGTGGGGAGGGATCCAAGACTCAGAAGTGGAAACTTATACTCCGCAACCTTCCTTTTAAGGCAAAAATCAACGAGATAAAAGAAAAATTCACAGCGGCAGGTTTTGTTTGGGATGTCTTTATTCCCAAGAATTCTGAGACAGGGATGTCCAAGGGGTTTGCATTTGTTAAGTTCACTAGCAAGCAAGATGCAGAAAATGCTATCCTTAAGTTCAACGGGAAAAAATTTGGTTCAAGGATCATTGCTGTCGACTGGGCTGTTCCTAAGAAAATATATACAACCGGTGCTCATTCTGCAGTGGAGGATGTAGAGCATGAGGATGAAGATGCAGATAGTGATGATGATGACGATGCATCAGAGGATGATGGTTTGGATCTTGAGAAAAAGTCTGAAGCCTCCGATAAGTATGGCTTTGAGTCAGATTTTGCTGATGAGGAGGAAGAGGAAGATGTCTCTGCTGTAGTAAATTTTGATGAAGAATTAGAAATAGCACGAAGGGTCCTTCAAAATGTTATTACATCCTCTGTGAAAGAAGCATCATCCTTGAGCAAAGGTTCCAGCCTCGAAAGAAATGCCACAAATTCTGATAAGTCAGTCGATGTTTCTAAGAAAGAAACGACTGAATCTCCGACGCTAGTGGCAAAGATGAAGGTGGAAAGCGCCCAAGAAGAAAAACAGAATGAATCTCTATCTAAAAACGCTGAAAATGATCTGCCAAGAACAGTTTTTATAAGCAATCTTCCTTTTGATTTGGACAATGAAGAAGTGAAGCAACGGTTTGCTAGTTTTGGAGAAGTGCAGTCATTTTTTCCTGTGCTTCATCCAATCACCAAGTATGACAGTATAGCATTTGTATTGTTATTCTTTCAAAGTTTCCTTGTAAATTATATAACATCCTTGTCAATGTGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_263180.p1 GENE.S_Transcript_263180~~S_Transcript_263180.p1 ORF type:internal len:501 (-),score=140.88,RRM_1|PF00076.18|0.025,RRM_1|PF00076.18|52,RRM_1|PF00076.18|8.4e-16,RRM_1|PF00076.18|0.00015,RRM_6|PF14259.2|0.27,RRM_6|PF14259.2|1.1e+04,RRM_6|PF14259.2|1.3e-09,RRM_6|PF14259.2|0.013,RRM_5|PF13893.2|0.02,RRM_5|PF13893.2|1.9e+03,RRM_5|PF13893.2|2.9e-06,RRM_5|PF13893.2|3.6e+03,RRM_5|PF13893.2|5.2e+02 S_Transcript_263180:2-1501(-)
FVQFATAEDADRSIEMKNGSSVGGRKVVVKHAAHRAPLEQRRPKPNQADSNEIDKTTDEKEGAPQPAPVKHEKPPTEQQIVGKSIQPVKRSKKPSIGVADEGSASEKQRVARTVIFGGLLNSEMADEVLRRAKEVDGVCSVTYPLPKQELEHHGLAQDGCRMEAASVLYASIRSARASVAALHQKEVNGGSVWARQLGGEGSKTQKWKLILRNLPFKAKINEIKEKFTAAGFVWDVFIPKNSETGMSKGFAFVKFTSKQDAENAILKFNGKKFGSRIIAVDWAVPKKIYTTGAHSAVEDVEHEDEDADSDDDDDASEDDGLDLEKKSEASDKYGFESDFADEEEEEDVSAVVNFDEELEIARRVLQNVITSSVKEASSLSKGSSLERNATNSDKSVDVSKKETTESPTLVAKMKVESAQEEKQNESLSKNAENDLPRTVFISNLPFDLDNEEVKQRFASFGEVQSFFPVLHPITKYDSIAFVLLFFQSFLVNYITSLSMW

Click here to download the sequence:
Link to NCBI Protein BLAST