Transcript Information: S_Transcript_263230.p1


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value3E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7473182629159
Replicate 21.225710530973
Replicate 31.7697575029718
Condition 2: 8 Hour
Replicate 12.6925997875168
Replicate 22.8247283636018
Replicate 31.7224927357561
Condition 3: 24 Hour
Replicate 10.99294924957246
Replicate 21.4880280327905
Replicate 30.89168843856471


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_263230.p1 GENE.S_Transcript_263230~~S_Transcript_263230.p1 ORF type:5prime_partial len:198 (+),score=5.37,zf-RVT|PF13966.2|2.7e-15,zf-RVT|PF13966.2|4.2e+03 S_Transcript_263230:3-596(+)
CGTGTTAACCTTGGGGGACGAAGCCCGTGTTGCCGATTGCACCGAGTCGGGGGCAAATTCGTTTCTAAGTCAGTGATTACGATCACGGCACGGAACACTCACTATCCCTGGAGATATCATAGAGTGGTTTGGGAGTCCATGGCTGTTCCTAAGCATCGCATTATTAGTTGGATGGCTGCTCACAACAGAATTGCTACTATTGATAATCTGCAGTATAGAGGAATGCAAATGGTGAATAGATGCTATCTTTGTGAACAGGATAGTGAGTCTTTTTTTCACTGTTCTTTCTCACAGGAGGTGTGGACAGGAGTATTAAAATGGCTTGGATTTCATGCTAGAGCCTGGAGTCTTAATAGGGAGCTAAAATGGTTTAGAAGACACTGCAGAGGCAAACATATAAGGAAAAGATGGGCTTGTGCTTGTCTAGTTGCTGCTGTGTATTTGATCTGGATGGAACGGAATCAGAGGTGCTTCAATGGCAGAGCAAAATCAGCAAAGGAGGTAATGAAATACTTGAAGTATACTGTATGTAATAGATTGTTGTATAGAAATGACAATATAGATATAGTGAATATCTTGTTAGATAGTTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_263230.p1 GENE.S_Transcript_263230~~S_Transcript_263230.p1 ORF type:5prime_partial len:198 (+),score=5.37,zf-RVT|PF13966.2|2.7e-15,zf-RVT|PF13966.2|4.2e+03 S_Transcript_263230:3-596(+)
RVNLGGRSPCCRLHRVGGKFVSKSVITITARNTHYPWRYHRVVWESMAVPKHRIISWMAAHNRIATIDNLQYRGMQMVNRCYLCEQDSESFFHCSFSQEVWTGVLKWLGFHARAWSLNRELKWFRRHCRGKHIRKRWACACLVAAVYLIWMERNQRCFNGRAKSAKEVMKYLKYTVCNRLLYRNDNIDIVNILLDSS*

Click here to download the sequence:
Link to NCBI Protein BLAST