Transcript Information: S_Transcript_263697.p2


Annotated TAIR IDAT2G34420.1
Annotated Gene Namephotosystem II light harvesting complex gene B1B2
Annotated Gene Symbol(s)LHB1B2, LHCB1.5
Annotation TypeOrtholog
Chromosome Positionchr2:14522716-14523513 | Reverse length=265
E-Value8.3E-92
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.3285555708047
Replicate 20
Replicate 30.45537619959508
Condition 2: 8 Hour
Replicate 10.26327642366831
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.27980014291787
Replicate 30.93414979278208


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_263697.p2 GENE.S_Transcript_263697~~S_Transcript_263697.p2 ORF type:3prime_partial len:162 (+),score=-15.26,Chloroa_b-bind|PF00504.17|1.5e-22 S_Transcript_263697:50-484(+)
ATGGCCGCCGCCACCATGGCCCTCTCGTCCCCGGCGCTGGCCGGCAAGGCCGCCGCGAAGGTGTTCGGCGAGGGGCGCATCACCATGCGCAAGTCGGCGGCGAAGCCCAAGCCCGCCGCGTCGGGGAGCCCGTGGTACGGCGCCGACCGCGTGCTCTACCTCGGCCCGCTCTCCGGCGAGCCGCCGAGCTACCTCACCGGCGAGTTCCCGGGCGACTACGGGTGGGACACCGCGGGGCTCTCCGCCGACCCGGAGACGTTCGCCAAGAACCGGGAGCTGGAGGTGATCCACTCCAGGTGGGCGATGCTCGGCGCGCTGGGCTGCGTGTTCCCGGAGCTCCTCGCCCGCAACGGCGTCAAGTTCGGCGAGGCGGTGTGGTTCAAGGCGGGGTCGCAGATCTTCAGCGAGGGCGGGCTCGACTACCTCGGCAACCCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_263697.p2 GENE.S_Transcript_263697~~S_Transcript_263697.p2 ORF type:3prime_partial len:162 (+),score=-15.26,Chloroa_b-bind|PF00504.17|1.5e-22 S_Transcript_263697:50-484(+)
MAAATMALSSPALAGKAAAKVFGEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNP

Click here to download the sequence:
Link to NCBI Protein BLAST