Transcript Information: S_Transcript_264999.p1


Annotated TAIR IDAT1G45474.1
Annotated Gene Namephotosystem I light harvesting complex gene 5
Annotated Gene Symbol(s)LHCA5
Annotation TypeHomolog
Chromosome Positionchr1:17179353-17180439 | Forward length=256
E-Value7E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.1147112122206
Replicate 21.2362770010676
Replicate 30.15898910416897
Condition 2: 8 Hour
Replicate 10.091919785849711
Replicate 20
Replicate 30.55127192081848
Condition 3: 24 Hour
Replicate 10
Replicate 21.758399174027
Replicate 30.65229425185645


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_264999.p1 GENE.S_Transcript_264999~~S_Transcript_264999.p1 ORF type:5prime_partial len:232 (+),score=-11.23,Chloroa_b-bind|PF00504.17|7.5e-36 S_Transcript_264999:1-696(+)
CTCGCTATCAAGCTGTTGGAGCGTGTCGCCAGACAATCGTGCGTGATGACGACCGCGCTCAAGACCTTCACCGCCCCTGTGCGCTGCACCGGCGCCGTGCGCAATGTACGCGCGCGCGCCGCAGAACGGCCCATGTGGTACCCTGGCATGCCACCGCCGGCTCATCTGAGCGGTCAGATGGCGGGCGACTTCGGTTTCGACCCTCTGGGTCTTGGCAAGCAGGGCAACGACCGCCTGAGGTGGTACCAAGAGGCGGAGAAGTACAACGGCCAGTGGGCCATGGCCGGCGTCGCCGGCATCATGGGCCAAGAGCTGCTAGGCGTCCAGCCCAAGTGGTTCGAGGCGGGCGCGAAGGAGTACAGCATCGACTTCCTGCCGCTGCTCGCTCTCGAGTTCATCTTCATGGGCTTCTTCGAGCTCAAGCGCTACCAGGGCTGGCGCAACACCGGCTCCTCGGGCGTCATCAACCAGTTCCCCTTTGACCCTGCGGGACTCAACAGCCCAAGCATGGAGCTCAAGCAGATCAAGAACGGCCGCCTCGCCATGGTCGCCTTTGTCGGCTTCGTCGTGCAGGCGCTCGTGACACGCGAGGGCCCAATTGAGGGCCTCATGTCGCACATCGCCAACCCCTTCGGCCACAACATCCTCACCAACCTCACCAACTTGTCGGGCACCGCCGCTAAGCCGTACAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_264999.p1 GENE.S_Transcript_264999~~S_Transcript_264999.p1 ORF type:5prime_partial len:232 (+),score=-11.23,Chloroa_b-bind|PF00504.17|7.5e-36 S_Transcript_264999:1-696(+)
LAIKLLERVARQSCVMTTALKTFTAPVRCTGAVRNVRARAAERPMWYPGMPPPAHLSGQMAGDFGFDPLGLGKQGNDRLRWYQEAEKYNGQWAMAGVAGIMGQELLGVQPKWFEAGAKEYSIDFLPLLALEFIFMGFFELKRYQGWRNTGSSGVINQFPFDPAGLNSPSMELKQIKNGRLAMVAFVGFVVQALVTREGPIEGLMSHIANPFGHNILTNLTNLSGTAAKPYS*

Click here to download the sequence:
Link to NCBI Protein BLAST