Transcript Information: S_Transcript_265069.p1


Annotated TAIR IDAT4G33170.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:15995701-15998673 | Reverse length=990
E-Value3E-147
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.61267340973077
Replicate 20.5396653560831
Replicate 30.53072621823311
Condition 2: 8 Hour
Replicate 11.656936801619
Replicate 21.7382443547413
Replicate 31.9015576280703
Condition 3: 24 Hour
Replicate 10.44004081851557
Replicate 20.26087840663422
Replicate 30.39919782511695


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_265069.p1 GENE.S_Transcript_265069~~S_Transcript_265069.p1 ORF type:5prime_partial len:695 (+),score=142.32,PPR_2|PF13041.2|0.002,PPR_2|PF13041.2|2.9e-07,PPR_2|PF13041.2|0.86,PPR_2|PF13041.2|7.7e-07,PPR_2|PF13041.2|1.2,PPR_2|PF13041.2|5.6e-14,PPR_2|PF13041.2|1.2e+04,PPR_2|PF13041.2|8.7e-10,PPR_2|PF13041.2|0.0046,PPR_2|PF13041.2|0.027,PPR_2|PF13041.2|1.3e+02,PPR|PF01535.16|0.00042,PPR|PF01535.16|9e-05,PPR|PF01535.16|3.5e+03,PPR|PF01535.16|0.0098,PPR|PF01535.16|3.9e-08,PPR|PF01535.16|0.044,PPR|PF01535.16|5.4e-06,PPR|PF01535.16|1.1e+03,PPR|PF01535.16|53,PPR|PF01535.16|1.8e-07,PPR|PF01535.16|0.13,PPR|PF01535.16|0.0013,PPR|PF01535.16|1.2,PPR|PF01535.16|7.8e+03,PPR_1|PF12854.3|0.033,PPR_1|PF12854.3|8.5,PPR_1|PF12854.3|1.4e+03,PPR_1|PF12854.3|0.06,PPR_1|PF12854.3|0.00078,PPR_1|PF12854.3|2.9,PPR_1|PF12854.3|0.0042,PPR_1|PF12854.3|2.5,PPR_1|PF12854.3|2.2e+03,PPR_1|PF12854.3|0.016,PPR_1|PF12854.3|2.3,PPR_1|PF12854.3|9.1e-06,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|0.014,PPR_3|PF13812.2|2.6,PPR_3|PF13812.2|0.0047,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|0.46,PPR_3|PF13812.2|3e+02,PPR_3|PF13812.2|4.1,PPR_3|PF13812.2|2e+02,DYW_deaminase|PF14432.2|6.5e-34 S_Transcript_265069:3-2087(+)
CCTATGAAATTTCAAAGGTTTTGGAACCTGAGTTCTTCAATACTGAAGGACCCTGAAGCCTTAGCCCAAATCATCCAAATTTTCACACAATCAAAGAAACTTACACATGGAAAACAGCTCCATGCCCAGCTCATTCGTTCAGTTCGTCAAGTATCCAAATATGTCAACAATCATTTGCTCAATATGTATGCTAAATGTGGGCAAGTCGAGTATGCCCATAAGGTGTTTGACAAAATGCCTCAACGAAACTTGGTGTCGTGGACTGCAATGATCACTGCTTTTTCACAGAATGCACTGTACTTGAGAGCCTTAGAAACATTTTGTGAGATGAGGGGTTCAGGGGAAAGCCCGAATGAATTCGCTTTTTCGAGTGTTATTCAGGCGACGACAATGCTTGGAGATGTCGAGTTTGGGGGCCAAATGCATTGCCTTAGTGTGAAATGTGGGTTTAACCATGAATTGTTTGTGGGTAGTAATTTAGCTGACATGTATTCTAAGTGTGGGAAGATTCATGATGCTTGTAAGGTCTTTGAGGAGATGCCTTATAAGGATGAAGTTTTGTGGACCTCAATGATTGATGGCTATGCGAAAAATGGTGACTTTGAGGAGGCTTTGTTGGGTTTTAAGAAGATGTTGCTTGAGGGGATACATATTGATAATTATGTACTTTCTAGTGCTTTGAGTGCTTGCGGGGCGATGAGGGCTTTGGTGTTTGGAAAGAGTGTTCATTCCATGATTTTGAAGTCAGGCTTTGATGAGGAGACTTCTGTTGGCAATGCACTTGTTGATGTTTACTCAAAAGCGGGTGACATGGAGAGTGCTTCAAAAGTGTTTGGCGATGATTATAGGGGTATGAACATTGTGTCATATACTTCTTTGATTGATGGGTATGTAGAAGCCGAGCAAATAGAGAAAGCACTTGAGATTTTTGTGGAGTTGAGGCGGCAGGATGTGGAGCCTAATGAATTCACTTTTTCCAGCTTGGTCAAGGCTTGTGCTAATCAAGCTGCTCTTGAGCAAGGTTCACAGCTTCATGCTCAAGTGGTTAAAATGAATTTCATGGTAGACCCATTTGTTTTGTCTGCTCTGGTTTTTATGTATGGAAAGTGTGGGTTGGTCGAGCAATCTGCACTCTTGTTTAATCGTGTAGAAAACCCAACTGAATTTGCATGGAATTCTTTGCTGGGAGGGTTTTCTCAGCATGGTTTAGGGAAAGAAGCCATTAAAGTTTTCAAAAGAATGGTTCATCGAGGTATAAAGCCCTCCACAATAACCTTTATCAATCTCTTAATTGGTTGCAGCCATGCTGGGTTGGTCAAAGAAGGACTAGATTTCTTCAATACTATGGAGAGTGTTTATGGGGTGGCACCTACAGAAGTGCACTATTCTTGTGTAATTGATCTGCTTGGTCGAGCGGGGAAGCTCAAAGAAGCCGAGGAATTCATAAATAACATGCCTTTTGAACCAAATGCTTTTGGTTGGTGTTCATATCTAGGGGCTTGTAGGGTTCATGGTGATAAAGAAAGGGCTATAATAGCAGCAGAGAAACTACAAAGGCTAGAACCTGAAAACAGTAGTGCTCACATTTTGCTCTCAAACATCTATGCAAAGGAAAGACAGTGGGAAGAAGTAAGAAGTTTGAGGAAGATGATGAAGGATGGCAACCTAAAGAAGCTACCGGGGTACAGCTGGGTTGATGTTGGGAACAAAACCCATGTATTTGGTGCTGATGACTGTTCTCATCCTAAACAGACAGAGATTTATGAGAAGCTTGATAGTCTCCTTGAGGAAATAAAGAGAATTGGATATGTACCCCAAAAAGACGTCATCCCTATTATTACAGATGACATTACAAAGGAGAAGATACTCCGAAATCACAGCGAAAAGATAGCTGTTGCATTTGCAGTAATGAATCTGCCACCTTGGAAACCTATCATCATCAAGAAGAACTTGAGGATATGCGCAGACTGTCACTCCGCCATCAAGCTAATGGCCAAGGTTGTAGGGAGAACTATAATTGTACGAGACATTAGCAGGTTCCATCATTTTTCTGATGGATCATGTTCCTGTGGAGATTACTGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_265069.p1 GENE.S_Transcript_265069~~S_Transcript_265069.p1 ORF type:5prime_partial len:695 (+),score=142.32,PPR_2|PF13041.2|0.002,PPR_2|PF13041.2|2.9e-07,PPR_2|PF13041.2|0.86,PPR_2|PF13041.2|7.7e-07,PPR_2|PF13041.2|1.2,PPR_2|PF13041.2|5.6e-14,PPR_2|PF13041.2|1.2e+04,PPR_2|PF13041.2|8.7e-10,PPR_2|PF13041.2|0.0046,PPR_2|PF13041.2|0.027,PPR_2|PF13041.2|1.3e+02,PPR|PF01535.16|0.00042,PPR|PF01535.16|9e-05,PPR|PF01535.16|3.5e+03,PPR|PF01535.16|0.0098,PPR|PF01535.16|3.9e-08,PPR|PF01535.16|0.044,PPR|PF01535.16|5.4e-06,PPR|PF01535.16|1.1e+03,PPR|PF01535.16|53,PPR|PF01535.16|1.8e-07,PPR|PF01535.16|0.13,PPR|PF01535.16|0.0013,PPR|PF01535.16|1.2,PPR|PF01535.16|7.8e+03,PPR_1|PF12854.3|0.033,PPR_1|PF12854.3|8.5,PPR_1|PF12854.3|1.4e+03,PPR_1|PF12854.3|0.06,PPR_1|PF12854.3|0.00078,PPR_1|PF12854.3|2.9,PPR_1|PF12854.3|0.0042,PPR_1|PF12854.3|2.5,PPR_1|PF12854.3|2.2e+03,PPR_1|PF12854.3|0.016,PPR_1|PF12854.3|2.3,PPR_1|PF12854.3|9.1e-06,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|0.014,PPR_3|PF13812.2|2.6,PPR_3|PF13812.2|0.0047,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|0.46,PPR_3|PF13812.2|3e+02,PPR_3|PF13812.2|4.1,PPR_3|PF13812.2|2e+02,DYW_deaminase|PF14432.2|6.5e-34 S_Transcript_265069:3-2087(+)
PMKFQRFWNLSSSILKDPEALAQIIQIFTQSKKLTHGKQLHAQLIRSVRQVSKYVNNHLLNMYAKCGQVEYAHKVFDKMPQRNLVSWTAMITAFSQNALYLRALETFCEMRGSGESPNEFAFSSVIQATTMLGDVEFGGQMHCLSVKCGFNHELFVGSNLADMYSKCGKIHDACKVFEEMPYKDEVLWTSMIDGYAKNGDFEEALLGFKKMLLEGIHIDNYVLSSALSACGAMRALVFGKSVHSMILKSGFDEETSVGNALVDVYSKAGDMESASKVFGDDYRGMNIVSYTSLIDGYVEAEQIEKALEIFVELRRQDVEPNEFTFSSLVKACANQAALEQGSQLHAQVVKMNFMVDPFVLSALVFMYGKCGLVEQSALLFNRVENPTEFAWNSLLGGFSQHGLGKEAIKVFKRMVHRGIKPSTITFINLLIGCSHAGLVKEGLDFFNTMESVYGVAPTEVHYSCVIDLLGRAGKLKEAEEFINNMPFEPNAFGWCSYLGACRVHGDKERAIIAAEKLQRLEPENSSAHILLSNIYAKERQWEEVRSLRKMMKDGNLKKLPGYSWVDVGNKTHVFGADDCSHPKQTEIYEKLDSLLEEIKRIGYVPQKDVIPIITDDITKEKILRNHSEKIAVAFAVMNLPPWKPIIIKKNLRICADCHSAIKLMAKVVGRTIIVRDISRFHHFSDGSCSCGDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST