Transcript Information: S_Transcript_26512.p1


Annotated TAIR IDAT4G08920.1
Annotated Gene Namecryptochrome 1
Annotated Gene Symbol(s)CRY1, BLU1, HY4, OOP2, ATCRY1
Annotation TypeOrtholog
Chromosome Positionchr4:5724260-5726905 | Forward length=681
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1132.66508402619
Replicate 2159.26199456545
Replicate 3185.3343806434
Condition 2: 8 Hour
Replicate 180.989870330095
Replicate 271.699941132239
Replicate 366.597463760372
Condition 3: 24 Hour
Replicate 1168.16382304576
Replicate 2135.17787068625
Replicate 3150.09183801733


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_26512.p1 GENE.S_Transcript_26512~~S_Transcript_26512.p1 ORF type:complete len:732 (+),score=124.14,FAD_binding_7|PF03441.10|1.8e-75,DNA_photolyase|PF00875.14|5.6e-41,Cryptochrome_C|PF12546.4|2.8e-29 S_Transcript_26512:144-2198(+)
ATGGCAGAAGGAGGGTGCAGTATAGTATGGTTCAGAAGGGATCTGAGAGTAGAAGACAATCCAGCACTATTAGCAGGGGTAAGGGCAGGGGCTGTAATTTGTGTATTTATATGGGCACCTGAAGAAGAAGGTCATTATTATCCAGGAAGGGTGTCTAGATGGTGGCTTAAACATAGCTTGGCTCAACTTGATTCTTCTTTACGCAGTCTTGGTACTTGTCTTGTTACTAAGCGATCTACTGATAGTGTTTCTTCTCTTCTTCAAGTCGTCAAGTCCACTGGTGCTACTCACCTCTTCTTCAATCACTTATATGATCCTCTGTCACTTGTTAGGGATCACCGCGCAAAGGAAGTTTTGACTGCGAATGGTATAACTGTGCGCTCCTTCAACGCGGATTTACTGTATGAACCATGGGAGGTTGTTGATGAGAGAGGCCAACCATTTACAACTTTTACATCTTTCTGGGAAAGATGCCTTAGCATGCCCTTTGATCCCGAGGCTCCCCTACTTCCACCTAAAAGGATCATCTCAGGTGATGTGTCACAGTGTCCGTCAGATACGTTGGTGTTTGAAGATGAATCGGAGAGGGGAAGCAATGCTCTACTTGCTCGGGCATGGTCACCTGGGTGGAGCAGTGCTGATAAGGCTCTCACCACTTTCATCAATGGACCATTAACAGAGTACTCCAAGAATCGGAGAAAGGCTGATAGTGCAACCACCTCCTTTCTCTCACCCCATTTGCATTTTGGGGAGGTCAGTGTGCGAAAGGTCTTTCATCTAGTTCGCATCAAGCAAGTTTCATGGGCCAATGAAGGGAACACAGCGGCTGATGAGAGTTGCAATGTGTTTCTCAAGTCTATTGGTTTGAGAGAGTATTCGAGATACATGAGCTTCAATCATCCATACAGTCACGAGAGGCCTTTACTTGGACACCTCAAGTTCTTTCCCTGGGTGATAGATGAAGGCTATTTCAAGTCATGGAGACAAGGGAGAACAGGCTATCCTTTGGTAGATGCCGGGATGAGAGAGCTATGGGCCACTGGCTGGCTACACGATCGAATACGAGTTGTTGTTTCTAGCTTCTTTGTCAAGGTTCTGCAGCTACCATGGAGGTGGGGTATGAAATACTTCTGGGATACACTCTTGGATGCAGATCTTGAAAGTGATGCCTTAGGCTGGCAATATATATCGGGTACTCTACCTGATGGACGTGAGTTCGACAGGATAGATAATCCACAGTTTGAAGGCTACAAATTTGATCCTAATGGTGAATACGTAAGGCGGTGGCTCCCGGAGCTTGCAAGACTACCCACTGAATGGATCCATCACCCATGGGATGCCCCAGAAACGGTACTACAAGCTGCAGGAGTGGAACTGGGATCAAATTACCCTCTCCCCATTGTAGAAATAGACGCAGCAAAAGCAAGGCTGCAAGAAGCCCTCTCACAGATGTGGCAACAAGAAGCAGCACACAGGGCCGCTCTTGAGAATGGGACTGAAGAAGGGCTTGGAGATTCTGCTGAAACAGACCCTATTGCGTTCCCACAGGATCTACAGATGGATATTGACCGTGAACCTGCGAGAAATAACCAAATTGCAAATAACCGCCTTTACGAGGATCAGATGGTCCCTAGCATCACCTCCACCTTGTTCAGGGTTGAAGATGATGAAACCTCTTCTGATCTTCGGCAGCCTTTGGTGGAAGATGGCAGAGCAGAGGTTCCTAGAAATGTACATGCAGATCAAGAAAGAGAACCACTGCATCAAGGAGCTTTGCCAACTCCCACAAGCAATAACAATAATGGGCCGCCACCACAAGTAAATATCATATTTGGGTTGCAGAATGTAGATGACATCGCTGAATCATCAAGTACTAGTGGTAGCCGGGGAGAAAGGAGTAGTGGGGTTGTTCCTGTTTGGTCGCCCTCGAGCTCCACATTCCCAGATCAGTTTGTAACTGATGAAGCTGGAATAGGACCCAGTTCCTCTTTCTTGCAGAGGCATCCTCAGTCACACCAACTGGTGAATTGGAGGCGGCTTTCTCAAACTGGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_26512.p1 GENE.S_Transcript_26512~~S_Transcript_26512.p1 ORF type:complete len:732 (+),score=124.14,FAD_binding_7|PF03441.10|1.8e-75,DNA_photolyase|PF00875.14|5.6e-41,Cryptochrome_C|PF12546.4|2.8e-29 S_Transcript_26512:144-2198(+)
MAEGGCSIVWFRRDLRVEDNPALLAGVRAGAVICVFIWAPEEEGHYYPGRVSRWWLKHSLAQLDSSLRSLGTCLVTKRSTDSVSSLLQVVKSTGATHLFFNHLYDPLSLVRDHRAKEVLTANGITVRSFNADLLYEPWEVVDERGQPFTTFTSFWERCLSMPFDPEAPLLPPKRIISGDVSQCPSDTLVFEDESERGSNALLARAWSPGWSSADKALTTFINGPLTEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNTAADESCNVFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVIDEGYFKSWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWDAPETVLQAAGVELGSNYPLPIVEIDAAKARLQEALSQMWQQEAAHRAALENGTEEGLGDSAETDPIAFPQDLQMDIDREPARNNQIANNRLYEDQMVPSITSTLFRVEDDETSSDLRQPLVEDGRAEVPRNVHADQEREPLHQGALPTPTSNNNNGPPPQVNIIFGLQNVDDIAESSSTSGSRGERSSGVVPVWSPSSSTFPDQFVTDEAGIGPSSSFLQRHPQSHQLVNWRRLSQTG*

Click here to download the sequence:
Link to NCBI Protein BLAST