Transcript Information: S_Transcript_26525.p1


Annotated TAIR IDATCG00740.1
Annotated Gene NameRNA polymerase subunit alpha
Annotated Gene Symbol(s)RPOA
Annotation TypeOrtholog
Chromosome PositionchrC:77901-78890 | Reverse length=329
E-Value1.6E-176
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1751.44644799139
Replicate 2513.59280609297
Replicate 3566.4036357216
Condition 2: 8 Hour
Replicate 1593.75480187899
Replicate 2744.50578260074
Replicate 3623.89039858908
Condition 3: 24 Hour
Replicate 1758.84111666507
Replicate 2686.23049150022
Replicate 3732.59702093418


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_26525.p1 GENE.S_Transcript_26525~~S_Transcript_26525.p1 ORF type:3prime_partial len:305 (+),score=2.96,RNA_pol_A_bac|PF01000.22|3e-13,RNA_pol_L|PF01193.20|3.6e-13,RNA_pol_A_CTD|PF03118.11|5.2e+03,RNA_pol_A_CTD|PF03118.11|3.5e-05 S_Transcript_26525:6833-7744(+)
ATGATCAATTTTTATAATATTACTATGGTTCGAGAGAAAATCAGAGTATCTACTCGGACACTGCAGTGGAAGTGTGTTGAATCAAGAACGGATAGTAAATGTCTTTATTATGGGCGCTTTATTCTCTCTCCACTTATGAAAGGTCAAGCTGACACAATAGGAATTGCGATGCGAAGAGCTTTGCTTGGAGAAATAGAAGGAACATGCATCACACGTGCAAAATTTGAGAAAATACCACATGAATACTCGACCATAGTAGGTATTCAAGAATCGGTACACGAAATTTTAATGAATTTGAAAGAAATTGTATTGCGAAGTAATCTATATGGAACTTGTGAGGCGTCTATTTGTGTTAGGGGCCCTAAATGTGTAACTGCTCGAGATATAATCTTGCCACCTTATGTCGAAATAGTTGACAATACACAGCATATAGCTAGCTTAATGGAACCAATTGATTTGTGTATTGGATTACAACTCGAAAGAAATCGCGGATATCGTAAAAAAGCGCCAAATAACTTTCAAGATGGAAGTTATCCTATAGATGCTCTATTCATGCCTGTTCGAAACGTGAATCATAGTATTCATTCTTATGGGAATGGGAATGAAAAAGAAGAAATACTTTTTCTCGAAATATGGACAAATGGAAGTTTAACTCCGAAAGAAGCACTTTATGAAGCTTCCCGGAATTTAATTGATTTATTTATTCCTTTTATACATGCAGAAGAAGAAAACTTACATTTAGAGGACAATCAACACAAAGTTTCTTTACCCCTTTTTACCTTTCACAATAGATTGACTGAACTAAAGAAAAACAAAAAAAAAATAGCATTGAAATATATATTTATTGACCAATTAGAACTTCCACCTAGGATCTACAATTACCTAAAAAAGTCCAATATACATACAGTATTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_26525.p1 GENE.S_Transcript_26525~~S_Transcript_26525.p1 ORF type:3prime_partial len:305 (+),score=2.96,RNA_pol_A_bac|PF01000.22|3e-13,RNA_pol_L|PF01193.20|3.6e-13,RNA_pol_A_CTD|PF03118.11|5.2e+03,RNA_pol_A_CTD|PF03118.11|3.5e-05 S_Transcript_26525:6833-7744(+)
MINFYNITMVREKIRVSTRTLQWKCVESRTDSKCLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKFEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTCEASICVRGPKCVTARDIILPPYVEIVDNTQHIASLMEPIDLCIGLQLERNRGYRKKAPNNFQDGSYPIDALFMPVRNVNHSIHSYGNGNEKEEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFIHAEEENLHLEDNQHKVSLPLFTFHNRLTELKKNKKKIALKYIFIDQLELPPRIYNYLKKSNIHTVL

Click here to download the sequence:
Link to NCBI Protein BLAST