Transcript Information: S_Transcript_265441.p1


Annotated TAIR IDATMG00310.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)ORF154
Annotation TypeHomolog
Chromosome PositionchrM:90883-91347 | Reverse length=154
E-Value2E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0964289813271
Replicate 22.2207621874085
Replicate 31.0896146045016
Condition 2: 8 Hour
Replicate 10.93327747558569
Replicate 20.048953716935945
Replicate 31.212717806848
Condition 3: 24 Hour
Replicate 11.0038130269201
Replicate 21.289407223162
Replicate 32.1524282971543


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_265441.p1 GENE.S_Transcript_265441~~S_Transcript_265441.p1 ORF type:complete len:457 (+),score=52.65,RVT_1|PF00078.23|3.2e-41 S_Transcript_265441:899-2269(+)
ATGCACCCTAGCAAGGCCCCAGGGCCCGATGGTATGAACGCCTTTTTCTTTCAAAAATATTGGTCTATAGTTGGCCCTTCTGTTTGTGATCTCGTTATGTGTATCTTGAATGGTCGGGATTTTCCTACTGAGATTAATCATACACATGTATGCCTTATTCCCAAAAAACACAAACCCTTGGCCCTAGCTGATTTTAGGCCTATAAGCCTTTGTAATGTTATCATTAAATTAGCCTCAAAGGTAATTGTGAATAGGTTGAAACCTTTTCTTCCCTCTATTGTCTCGGAGTCTCAAATTGCATTCACCCCTCGGAGACTAATAAGTGATAACATTGTGATTGCTTTTGAAGTCTTTCATGCTATGCACTGCAATATTAACAAAAAAGGGAGTATGGCTCTTAAATTGGACATGAGCAAGGCTTATGATAGAGTTGAGTGGACCTTTTTGGAGGAGATTATGCTTAAAATCGAGTTTCGAGAGTCTTGGGTGCAGATGGTTATGAAGTGTGTCAAAACGGTTTCCTATTCTTTCATTATTAATAGGGAACCGTGTGGTCTAGTTCATCCAACTAGGGGGCTCAGACAAGGGGATCCCCTTTCCCCATACCTCTTTCTTTTCTGTGCTGAAGGTCTCTCGGGTTTACTTTCTCATGCTGTTGATACTAATGACTTTCAAGGTGTGTGTGTGGCCCCAGGTGCTCCATCTATATCCCACCTTCTTTTTGCAGATGACTCCATCATATTTTCCAAAGCTGATGAGGCCCACGCCGTGAAGATTGGCACAATTTTGCAGTGGTATGAGGAAGCTTCAGGTCAGCAAATTAATAGAGACAAAACTACGGTGTCCTTCAGTAAGGGTGTCCTGACAATGACAAGAGAACATCTAAGCGACCTTCTTGGAGTTCAAGTGGTTTCAAGTCAAGACAAGTATCTTGGACTACCCACCTTCATTGGTAGATCAAGGAAGAAAGCATTCATGCCCATCAAGGATAGGATTCAAAGGAAGTTACAGGTTTGGATGAACAAGTATCTATCATGGTCAGGTAAGGAAGTATTAATTAAGGCGGTTGCCCAAGCTATTCCTTCCTATGCCATGAGTGTGTTCAAACTACCTAGGGACTTCGTTGATGAGATTAATGGTTTGATCCGGAAATTTTGGTGGGGACATAAAGACAGGAAACGGAAGATACACTGGGTAAAGTGGAATTCTCTTTGTCGCTCTAAGGATGATGGTGGACTTGGATTTCGGGATTTGGGTGCTTTCAATGACGCTCTCTTGGCAAAGCAACTATGGCGCCTTCTAACATCTCCCAACTCTCTGTATGCCCACATTCTAAAAGCTAGATATTTCCCTTCATGTGATATTATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_265441.p1 GENE.S_Transcript_265441~~S_Transcript_265441.p1 ORF type:complete len:457 (+),score=52.65,RVT_1|PF00078.23|3.2e-41 S_Transcript_265441:899-2269(+)
MHPSKAPGPDGMNAFFFQKYWSIVGPSVCDLVMCILNGRDFPTEINHTHVCLIPKKHKPLALADFRPISLCNVIIKLASKVIVNRLKPFLPSIVSESQIAFTPRRLISDNIVIAFEVFHAMHCNINKKGSMALKLDMSKAYDRVEWTFLEEIMLKIEFRESWVQMVMKCVKTVSYSFIINREPCGLVHPTRGLRQGDPLSPYLFLFCAEGLSGLLSHAVDTNDFQGVCVAPGAPSISHLLFADDSIIFSKADEAHAVKIGTILQWYEEASGQQINRDKTTVSFSKGVLTMTREHLSDLLGVQVVSSQDKYLGLPTFIGRSRKKAFMPIKDRIQRKLQVWMNKYLSWSGKEVLIKAVAQAIPSYAMSVFKLPRDFVDEINGLIRKFWWGHKDRKRKIHWVKWNSLCRSKDDGGLGFRDLGAFNDALLAKQLWRLLTSPNSLYAHILKARYFPSCDIM*

Click here to download the sequence:
Link to NCBI Protein BLAST