Transcript Information: S_Transcript_265647.p1


Annotated TAIR IDAT5G28320.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28400.1); Has 1861 Blast hits to 1522 proteins in 246 species: Archae - 19; Bacteria - 134; Metazoa - 673; Fungi - 145; Plants - 123; Viruses - 8; Other Eukaryotes - 759 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10301936-10306142 | Forward length=927
E-Value7E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.24193637486528
Replicate 20.8022832566369
Replicate 31.8442736083601
Condition 2: 8 Hour
Replicate 12.7141405858169
Replicate 21.830423979614
Replicate 31.3564630294079
Condition 3: 24 Hour
Replicate 10.59576954974348
Replicate 21.4422425548585
Replicate 30.91716525109513


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_265647.p1 GENE.S_Transcript_265647~~S_Transcript_265647.p1 ORF type:3prime_partial len:110 (+),score=39.87 S_Transcript_265647:3-329(+)
ATGCCATCTGAGGCCACTACTATGGTTACTGAAAGGCCTCAGCTTGATAAGCAGGAGCTGTTGGATAACATTAGGAAAGCAAAAAACTTGAATAATAAGCAGGGTGAGCTAGATTTTGCAAGTTCTCAGGGTGTTGGTGGTGTAGAAATGGATGCCAGAATTGGGGAGATACAAAGAATGGCAAGACTTGCTAGGGAGATTGAGAGAGGGGAGAGCTATCCAATTAAGGGGGGTGGATTGGATGAACAAACTTCGAATGAGCTGCCTGTGATTGAGACAGGCGCTGCTGAAGAGCCTTCGGACTCTGTCAAGATGGATGAATTTCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_265647.p1 GENE.S_Transcript_265647~~S_Transcript_265647.p1 ORF type:3prime_partial len:110 (+),score=39.87 S_Transcript_265647:3-329(+)
MPSEATTMVTERPQLDKQELLDNIRKAKNLNNKQGELDFASSQGVGGVEMDARIGEIQRMARLAREIERGESYPIKGGGLDEQTSNELPVIETGAAEEPSDSVKMDEFQ

Click here to download the sequence:
Link to NCBI Protein BLAST