Transcript Information: S_Transcript_265740.p1


Annotated TAIR IDAT1G05760.1
Annotated Gene NameMannose-binding lectin superfamily protein
Annotated Gene Symbol(s)RTM1
Annotation TypeOrtholog
Chromosome Positionchr1:1723797-1724440 | Reverse length=174
E-Value5.1E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.9561557330005
Replicate 20.39633753696134
Replicate 30.11043554541078
Condition 2: 8 Hour
Replicate 10.76618168804071
Replicate 20.26792633101469
Replicate 31.1487582541607
Condition 3: 24 Hour
Replicate 10.6540384278621
Replicate 20.54284578625982
Replicate 31.0572114421306


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_265740.p1 GENE.S_Transcript_265740~~S_Transcript_265740.p1 ORF type:complete len:167 (+),score=21.46,Jacalin|PF01419.13|8.6e-11 S_Transcript_265740:98-598(+)
ATGCTAAAAGTTGGATCCTATGATCCGGAAGATCCCAGCATTATGACTTGGGACGGGAAGGGACTAGCAAACATTGCTCAGATTTTCATATGGCGTGGCTCATTTATAAATTCTCTTCAGTTCCAGTACGTTGACGATGATGGCAATTTGGTGCTTTCCACTATATTTGGCTGCCCCAACCCAAAATCTCTTAATTTTGATACGGTGACATTTACTGACTCCCCTAAGGAGTATATTACAAGAGTGACTGGTTCCAATGGTAGTCCTTATGACCGTGGTGTGAGAACATTGACAATTGAAACAAATGAAGCCACTTACGGGCCGTTTGGAAGCCAGCGACCAGGCGATGATCTTTTTAACTACTGGTTTGGACCCTTAAATCAGTTTGGTGGATTTCATGGCACCTCTTCCTCTGAACACCTTACTTCTATTGGTGTTTATGTCCAACCTATACAAGATCTTGGGGCATTTTCAAAGAAGACTGAACTCCTAATCAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_265740.p1 GENE.S_Transcript_265740~~S_Transcript_265740.p1 ORF type:complete len:167 (+),score=21.46,Jacalin|PF01419.13|8.6e-11 S_Transcript_265740:98-598(+)
MLKVGSYDPEDPSIMTWDGKGLANIAQIFIWRGSFINSLQFQYVDDDGNLVLSTIFGCPNPKSLNFDTVTFTDSPKEYITRVTGSNGSPYDRGVRTLTIETNEATYGPFGSQRPGDDLFNYWFGPLNQFGGFHGTSSSEHLTSIGVYVQPIQDLGAFSKKTELLIN*

Click here to download the sequence:
Link to NCBI Protein BLAST