Transcript Information: S_Transcript_265805.p2


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value3E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.20630233515644
Replicate 20.85514688207422
Replicate 30.1429669463845
Condition 2: 8 Hour
Replicate 10.49593930970077
Replicate 21.2139762827759
Replicate 31.1566739010455
Condition 3: 24 Hour
Replicate 11.6934018209763
Replicate 20.52706538549645
Replicate 30.97759862035334


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_265805.p2 GENE.S_Transcript_265805~~S_Transcript_265805.p2 ORF type:complete len:129 (+),score=18.13,gag_pre-integrs|PF13976.2|6.9e-14 S_Transcript_265805:174-560(+)
ATGACAAACAATTTGATGTCAGTTTCACAATTGACAACATCCGGAAACTATGTTGTTTTCGGGCCACATGATGTGAAGGTGTACCACAATTTGGAGGATGTATCATCTCCCATCATACAAGGGAGACGATTGGAATCAATTTATGTGATGTCGGCGCAAACGACATATATAGACAAAGCAAGAAGAAATGAGACAGCGGATTTATGGCATGCACGTTTGGGGCATGTAAGTTATAACAAGTTTAAGGTAATGATGAAGAAGTCAATGCTCAAGGGTCTTCCTCAGCTAGATGTCAAAGATGACATTGTGTGTGTTGGATGTCAATTTGGAAAAGCACATCAACTGCCATATGAAGAGTCGAAGTTCCATGAATGTCGTTGGAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_265805.p2 GENE.S_Transcript_265805~~S_Transcript_265805.p2 ORF type:complete len:129 (+),score=18.13,gag_pre-integrs|PF13976.2|6.9e-14 S_Transcript_265805:174-560(+)
MTNNLMSVSQLTTSGNYVVFGPHDVKVYHNLEDVSSPIIQGRRLESIYVMSAQTTYIDKARRNETADLWHARLGHVSYNKFKVMMKKSMLKGLPQLDVKDDIVCVGCQFGKAHQLPYEESKFHECRWN*

Click here to download the sequence:
Link to NCBI Protein BLAST