Transcript Information: S_Transcript_265810.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value4E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.29014136485895
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_265810.p1 GENE.S_Transcript_265810~~S_Transcript_265810.p1 ORF type:3prime_partial len:147 (+),score=20.45,gag_pre-integrs|PF13976.2|9e-14 S_Transcript_265810:174-611(+)
ATGACAAACAATTTGATGTCAGTTTCACAATTGACAGCATCCGGAAACCATGTAGTTTTCGGACCACATGATGTGAAGGTGTATCACAATTTGGAGGATGTATCATCTCCCATCATACAAGGGAGACGATTGGAATCAGTCTACGTGATGTCGGCACAGACGGCATATGTAGACAAAGCAAGGAGAAATGAGACGGCTGATTTATGGCATGCACGTTTGGGGCATGTAAGTTATAACAAGTTTAAGGTAATGATGAAGAAGTCAATGCTCAAGGGTCTTCCTCATCTAGATGTCAAAGAAGACATTGTGTGTGCTGGATGTCAATTTGGAAAAGCACACCAACTACCATATGAAGAGTCAAAGTTCCATGCCAAGATGCCGTTGGAGTTAGTTCACTCTGATGTATTCAGTCCAGTGAAGCAGCAATCGATCAGTGGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_265810.p1 GENE.S_Transcript_265810~~S_Transcript_265810.p1 ORF type:3prime_partial len:147 (+),score=20.45,gag_pre-integrs|PF13976.2|9e-14 S_Transcript_265810:174-611(+)
MTNNLMSVSQLTASGNHVVFGPHDVKVYHNLEDVSSPIIQGRRLESVYVMSAQTAYVDKARRNETADLWHARLGHVSYNKFKVMMKKSMLKGLPHLDVKEDIVCAGCQFGKAHQLPYEESKFHAKMPLELVHSDVFSPVKQQSISG

Click here to download the sequence:
Link to NCBI Protein BLAST