Transcript Information: S_Transcript_265845.p1


Annotated TAIR IDAT3G54020.1
Annotated Gene NameArabidopsis Inositol phosphorylceramide synthase 1
Annotated Gene Symbol(s)AtIPCS1
Annotation TypeOrtholog
Chromosome Positionchr3:20006098-20008020 | Forward length=305
E-Value1E-94
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.8548639545162
Replicate 24.4571292035383
Replicate 32.2354831616485
Condition 2: 8 Hour
Replicate 14.7389756260296
Replicate 24.1805979781307
Replicate 33.3373296755274
Condition 3: 24 Hour
Replicate 13.8614693038929
Replicate 23.3194471500711
Replicate 33.9489059422151


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_265845.p1 GENE.S_Transcript_265845~~S_Transcript_265845.p1 ORF type:internal len:198 (+),score=19.15,PAP2_C|PF14360.2|1.6e+02,PAP2_C|PF14360.2|2.3e-23 S_Transcript_265845:1-591(+)
CTTCAACTATGGAGGCTATGGAGGCTTCACTTTTCAACTATGGTTGGTGGGAAAGAGAAAGTTGGAGCTGAATTGTTTAACATTTCCCTGTGTTTTGATGCTGTTTGTATTCTACTGCAGTGGACATTTCATCCATTTATTCTCAAAAGTAAAAAGATTTATACGGTGCTGTTGTGGTCCAGGGTCCTGGCTTTCTTAGTTGCATCTCAGAGTCTTAGGATCATCACATTCTACTCTACACAACTTCCTGGTCCAAGTTACCATTGTCGTGAGGGTTCAGAACTTGCTACTCTCCCTCCTCCACACAGTGCACTTGAGTTCTTTTTACTCAACTTCCCTCAAGGGGCATTTTATGGCTGTGGTGACCTCATTTTTTCATCCCATATGATATTTACACTAGTTTTCATCCGAACGTATCACAAATATGGCACAAAGAGGTGTATCAAGCAGTTCGGTTGGCTACTTGTTGTGGTGCAGAGCTTATTGATCATAGCTTCTCGCAAACATTATACTGTAGATGTGGTTGTAGCATGGTATACCGTCAACCTAGTGGTTTTCTTTGTTGACAACAATCTGCCAGAAATGCCCGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_265845.p1 GENE.S_Transcript_265845~~S_Transcript_265845.p1 ORF type:internal len:198 (+),score=19.15,PAP2_C|PF14360.2|1.6e+02,PAP2_C|PF14360.2|2.3e-23 S_Transcript_265845:1-591(+)
LQLWRLWRLHFSTMVGGKEKVGAELFNISLCFDAVCILLQWTFHPFILKSKKIYTVLLWSRVLAFLVASQSLRIITFYSTQLPGPSYHCREGSELATLPPPHSALEFFLLNFPQGAFYGCGDLIFSSHMIFTLVFIRTYHKYGTKRCIKQFGWLLVVVQSLLIIASRKHYTVDVVVAWYTVNLVVFFVDNNLPEMPE

Click here to download the sequence:
Link to NCBI Protein BLAST