Transcript Information: S_Transcript_266032.p1


Annotated TAIR IDAT5G63180.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:25341106-25343113 | Reverse length=432
E-Value1.9E-217
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.8203578415466
Replicate 20.80521129771952
Replicate 30.35898269749101
Condition 2: 8 Hour
Replicate 10
Replicate 20.87092354801855
Replicate 32.4375786798884
Condition 3: 24 Hour
Replicate 11.3287642025909
Replicate 20.55143093859726
Replicate 30.12273500927064


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_266032.p1 GENE.S_Transcript_266032~~S_Transcript_266032.p1 ORF type:complete len:411 (+),score=32.24,Pec_lyase_C|PF00544.15|8e-24,Beta_helix|PF13229.2|3e-06 S_Transcript_266032:38-1270(+)
ATGATGATGATTCACATGGGCAGTATTTCTCTGTCTCTTTCTCTATTATGTTACTATGTTAGCAGCCCCTTAGCCCTTGCTTCATCCATTTCACCTCAACATCCTGAGCTGGTGGTGCACGACGTCCAGAGCAAAATCAATGCCTCAAGGAGGAACTTGGGGTACCTCTCATGTGGAACGGGGAACCCAATAGACGACTGTTGGAGATGCGACCAAGACTGGGCCAACAACCGCCAACGCCTGGCCGATTGCGGCATAGGCTTTGGCCGCCACGCCTTGGGCGGGCGAGGCGGCCGAATCTATGTGGTCACAGATTCGAGCGACAACGACCCAGCAAACCCAAGGCCAGGGACTCTCCGACATGCCGTGATACAAATCGAACCATTATGGATCATATTCAAACATGACATGGTTATAAACCTAAAACAACAACTCGTCATGAACTCATATAAGACCATCGATGGGAGAGGCGCCAGTGTCCACATCACTGGAGGTGGATGTATAACCATACATAGTGTCAACAACATCATCATACATGGCATCCACATACATGATTGTAAGCCTGTCGGGAATGCCATGATCAAGGTGTCCCCTAATAAAGATCACTTTTGGACTACATCGGATGGGGATGGAATAACCATACGTAGAGCCAGAGATATTTGGGTGGATCATTGTTCAATGTCGAATTGTTATGATGGACTCATTGATGTTACATTGGCTTCCACTTATGTCACCATTTCTAACAATTACATGACCCATCATGATAAGGCCATGCTTTTGGGTCATAGTGATTCTTTTGTTCAAGATAAGATCATGCAAGTCACTGTGGCTTTCAACCATTTTGGTGAAGGACTTGTTCAGAGAATGCCCAGGTGTAGACATGGATATTTCCATGTAGTAAATAATGATTATACACACTGGGAGATGTATGCGATTGGTGGAAGTGCATCCCCAACAATTTATAGTGAAGGCAACAGGTTTCTTGCGCCGGATGACTCCAATAAGAAACAGGTGACAAAGCATGAGCTGGCACCAGAGAGTGAATGGAGGCACTGGAACTGGAGATCCGAAGGGGACTTGATGTTAAACGGAGCATATTTCCAACAATCTGGGGCTGGGGCTGCCTCAAGCTATGCCAGGGCATTTAGTTTAAGCGCTAGACCCTCTCATCTTGTGGGTACCATCACCAATGGTGCTGGGGTACTTAGCTGCAAGAAAGGCTCTCACTGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_266032.p1 GENE.S_Transcript_266032~~S_Transcript_266032.p1 ORF type:complete len:411 (+),score=32.24,Pec_lyase_C|PF00544.15|8e-24,Beta_helix|PF13229.2|3e-06 S_Transcript_266032:38-1270(+)
MMMIHMGSISLSLSLLCYYVSSPLALASSISPQHPELVVHDVQSKINASRRNLGYLSCGTGNPIDDCWRCDQDWANNRQRLADCGIGFGRHALGGRGGRIYVVTDSSDNDPANPRPGTLRHAVIQIEPLWIIFKHDMVINLKQQLVMNSYKTIDGRGASVHITGGGCITIHSVNNIIIHGIHIHDCKPVGNAMIKVSPNKDHFWTTSDGDGITIRRARDIWVDHCSMSNCYDGLIDVTLASTYVTISNNYMTHHDKAMLLGHSDSFVQDKIMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTIYSEGNRFLAPDDSNKKQVTKHELAPESEWRHWNWRSEGDLMLNGAYFQQSGAGAASSYARAFSLSARPSHLVGTITNGAGVLSCKKGSHC*

Click here to download the sequence:
Link to NCBI Protein BLAST