Transcript Information: S_Transcript_266269.p1


Annotated TAIR IDAT1G05990.1
Annotated Gene NameEF hand calcium-binding protein family
Annotated Gene Symbol(s)RHS1
Annotation TypeHomolog
Chromosome Positionchr1:1818588-1819040 | Forward length=150
E-Value4E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.949621290682
Replicate 213.525081721082
Replicate 317.73611784285
Condition 2: 8 Hour
Replicate 137.33985967406
Replicate 232.143460689262
Replicate 332.586295763937
Condition 3: 24 Hour
Replicate 114.061074430727
Replicate 213.112013593979
Replicate 311.499706069766


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_266269.p1 GENE.S_Transcript_266269~~S_Transcript_266269.p1 ORF type:5prime_partial len:261 (-),score=67.12,EF-hand_1|PF00036.28|2.5e-07,EF-hand_1|PF00036.28|0.00059,EF-hand_1|PF00036.28|1.5e+03,EF-hand_1|PF00036.28|2.7e-07,EF-hand_1|PF00036.28|8.2e-09,EF-hand_7|PF13499.2|1.5e-14,EF-hand_7|PF13499.2|1.5e-11,EF-hand_6|PF13405.2|4.9e-06,EF-hand_6|PF13405.2|0.017,EF-hand_6|PF13405.2|6.2e+02,EF-hand_6|PF13405.2|1.8e-06,EF-hand_6|PF13405.2|0.0011,EF-hand_5|PF13202.2|2.7e-07,EF-hand_5|PF13202.2|0.033,EF-hand_5|PF13202.2|1.6e+04,EF-hand_5|PF13202.2|2.8e-06,EF-hand_5|PF13202.2|1.1e-05,EF-hand_8|PF13833.2|6.5e-08,EF-hand_8|PF13833.2|4.9e-11,EF-hand_9|PF14658.2|0.21,EF-hand_9|PF14658.2|0.00047,SPARC_Ca_bdg|PF10591.5|0.025,SPARC_Ca_bdg|PF10591.5|17,SPARC_Ca_bdg|PF10591.5|0.052,EF-hand_4|PF12763.3|35,EF-hand_4|PF12763.3|0.00029 S_Transcript_266269:146-928(-)
TTTGCTCTGTTCTGTTGGTGTAAAAATCTGGCAAGAAACAATAAGAACCAAGCAAGCAAGAAGAAAATGTTGATACCAATACTCACGTTGATATCTTCACTTCTTTTTCTTGCTGGTTTTTTAAACCTCAAGTTCCCAAATCTTACTAAGAAACTCTTATTACAAATCAAGAAACCTTTTCTTCCTTCCCCTGCCTCTGCCCTGCATCCTAGCTCCTCTTCATCTTCTATATCCTCCCAAACAAACACTCCAACAAACATCATAACAAAGGATGATGGCCTCAAGAAAGTTTTCGAGACGTTCGACAAGAATGGAGATGGGTTCATAACAAGGCAAGAGCTTCACGAATCTCTTAAAAACATTGGGATTTATGTGCCTAACAAGGAAGTGGAAGAAATGGTGGACAACTTGGACTCTAATAGAGATGGGCTGATTGATCTTGGTGAGTTTCAAGAGTTGTATAATTTGATGAAGGGTAAAAAGAATGAGAAGGGAGTTAGTGATAATTATAATGATAATGGTGACTACGACAATGATGATGATGGGGAATTGAAGAAGGCATTTGAAGTGTTTGATGGGGATAAAGATGGGTTAATATCGGTTGAAGAGCTAAGATTGGTGTTATCTTCCATGGGATTGAATGAAGGGAATAGAGAAGATGCTTGTAAGGCGATGATCAGTAAGGTGGATGTTGATGGGGATGGAAAGGTTAACTTTGAAGAGTTCAAGAAGATGATGAAAATTGGTTATGGTGATTCCACCTTTGATGTCTCCACTCTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_266269.p1 GENE.S_Transcript_266269~~S_Transcript_266269.p1 ORF type:5prime_partial len:261 (-),score=67.12,EF-hand_1|PF00036.28|2.5e-07,EF-hand_1|PF00036.28|0.00059,EF-hand_1|PF00036.28|1.5e+03,EF-hand_1|PF00036.28|2.7e-07,EF-hand_1|PF00036.28|8.2e-09,EF-hand_7|PF13499.2|1.5e-14,EF-hand_7|PF13499.2|1.5e-11,EF-hand_6|PF13405.2|4.9e-06,EF-hand_6|PF13405.2|0.017,EF-hand_6|PF13405.2|6.2e+02,EF-hand_6|PF13405.2|1.8e-06,EF-hand_6|PF13405.2|0.0011,EF-hand_5|PF13202.2|2.7e-07,EF-hand_5|PF13202.2|0.033,EF-hand_5|PF13202.2|1.6e+04,EF-hand_5|PF13202.2|2.8e-06,EF-hand_5|PF13202.2|1.1e-05,EF-hand_8|PF13833.2|6.5e-08,EF-hand_8|PF13833.2|4.9e-11,EF-hand_9|PF14658.2|0.21,EF-hand_9|PF14658.2|0.00047,SPARC_Ca_bdg|PF10591.5|0.025,SPARC_Ca_bdg|PF10591.5|17,SPARC_Ca_bdg|PF10591.5|0.052,EF-hand_4|PF12763.3|35,EF-hand_4|PF12763.3|0.00029 S_Transcript_266269:146-928(-)
FALFCWCKNLARNNKNQASKKKMLIPILTLISSLLFLAGFLNLKFPNLTKKLLLQIKKPFLPSPASALHPSSSSSSISSQTNTPTNIITKDDGLKKVFETFDKNGDGFITRQELHESLKNIGIYVPNKEVEEMVDNLDSNRDGLIDLGEFQELYNLMKGKKNEKGVSDNYNDNGDYDNDDDGELKKAFEVFDGDKDGLISVEELRLVLSSMGLNEGNREDACKAMISKVDVDGDGKVNFEEFKKMMKIGYGDSTFDVSTL*

Click here to download the sequence:
Link to NCBI Protein BLAST