Transcript Information: S_Transcript_266271.p1


Annotated TAIR IDAT2G43290.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)MSS3
Annotation TypeHomolog
Chromosome Positionchr2:17991308-17991955 | Reverse length=215
E-Value3E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.091768969776484
Replicate 20.15215716936217
Replicate 30.19078692500276
Condition 2: 8 Hour
Replicate 10.22060748603931
Replicate 20.69429875088807
Replicate 30.73502922775798
Condition 3: 24 Hour
Replicate 10.3013087378013
Replicate 20.46890644640719
Replicate 30.17394513382839


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_266271.p1 GENE.S_Transcript_266271~~S_Transcript_266271.p1 ORF type:internal len:290 (-),score=85.27,EF-hand_7|PF13499.2|1.8e-14,EF-hand_7|PF13499.2|1.3e+04,EF-hand_1|PF00036.28|2.8e-07,EF-hand_1|PF00036.28|0.00068,EF-hand_1|PF00036.28|1.9e+03,EF-hand_5|PF13202.2|3.1e-07,EF-hand_5|PF13202.2|0.038,EF-hand_5|PF13202.2|1.6e+04,EF-hand_6|PF13405.2|5.7e-06,EF-hand_6|PF13405.2|0.02,EF-hand_6|PF13405.2|1.6e+04,EF-hand_8|PF13833.2|7.7e-08 S_Transcript_266271:3-869(-)
TTTGCTCTGTTCTGTTGGTGTAAAAATCTGGCAAGAAACAATAAGAACCAAGCAAGCAAGAAGAAAATGTTGATACCAATACTCACGTTGATATCTTCACTTCTTTTTCTTGCTGGTTTTTTAAACCTCAAGTTCCCAAATCTTACTAAGAAACTCTTATTACAAATCAAGAAACCTTTTCTTCCTTCCCCTGCCTCTGCCCTGCATCCTAGCTCCTCTTCATCTTCTATATCCTCCCAAACAAACACTCCAACAAACATCATAACAAAGGATGATGGCCTCAAGAAAGTTTTCGAGACGTTCGACAAGAATGGAGATGGGTTCATAACAAGGCAAGAGCTTCACGAATCTCTTAAAAACATTGGGATTTATGTGCCTAACAAGGAAGTGGAAGAAATGGTGGACAACTTGGACTCTAATAGAGATGGGCTGATTGATCTTGGTGAGTTTCAAGAGTTGTATAATTTGATGAAGGGTAAAAAGAATGAGAAGGGAGTTAGTGATAATTATAATGGTAATGGTAACGACGACGACGACGATGATGATGATGAATTTGGGGAAGAATGGGAGGTCAGAATCGAAGATAGTGATGGTGATGGTGATTTTAGAGGTGGTGATTTAGTGATTGAATATGAAGATGAAGTTCAAAATGAAGTTGAAGTTGAACATGAGGATGATGAGGATGAGGATGAATATGTAGAAGAGGAGGTTGAATTGGACCATCATGTGTACAGTAATGTTGCTTCAGTTGGAAATATTCCATCATCATCTTTTATGTACAGAGTGCCAGATCAGTTTCAGCAGGATGATGATGATCATGTTATGGGGTACTGGTGGAATCGGGATAGTGGTATTAATGATAATAGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_266271.p1 GENE.S_Transcript_266271~~S_Transcript_266271.p1 ORF type:internal len:290 (-),score=85.27,EF-hand_7|PF13499.2|1.8e-14,EF-hand_7|PF13499.2|1.3e+04,EF-hand_1|PF00036.28|2.8e-07,EF-hand_1|PF00036.28|0.00068,EF-hand_1|PF00036.28|1.9e+03,EF-hand_5|PF13202.2|3.1e-07,EF-hand_5|PF13202.2|0.038,EF-hand_5|PF13202.2|1.6e+04,EF-hand_6|PF13405.2|5.7e-06,EF-hand_6|PF13405.2|0.02,EF-hand_6|PF13405.2|1.6e+04,EF-hand_8|PF13833.2|7.7e-08 S_Transcript_266271:3-869(-)
FALFCWCKNLARNNKNQASKKKMLIPILTLISSLLFLAGFLNLKFPNLTKKLLLQIKKPFLPSPASALHPSSSSSSISSQTNTPTNIITKDDGLKKVFETFDKNGDGFITRQELHESLKNIGIYVPNKEVEEMVDNLDSNRDGLIDLGEFQELYNLMKGKKNEKGVSDNYNGNGNDDDDDDDDEFGEEWEVRIEDSDGDGDFRGGDLVIEYEDEVQNEVEVEHEDDEDEDEYVEEEVELDHHVYSNVASVGNIPSSSFMYRVPDQFQQDDDDHVMGYWWNRDSGINDNR

Click here to download the sequence:
Link to NCBI Protein BLAST