Transcript Information: S_Transcript_266403.p1


Annotated TAIR IDAT3G47520.1
Annotated Gene Namemalate dehydrogenase
Annotated Gene Symbol(s)MDH
Annotation TypeOrtholog
Chromosome Positionchr3:17513657-17514868 | Forward length=403
E-Value3.7E-194
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.122099589863
Replicate 217.17176151103
Replicate 318.887139362723
Condition 2: 8 Hour
Replicate 118.344974321004
Replicate 221.34759532851
Replicate 320.237214352681
Condition 3: 24 Hour
Replicate 116.528417869992
Replicate 217.694156507799
Replicate 317.199611003971


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_266403.p1 GENE.S_Transcript_266403~~S_Transcript_266403.p1 ORF type:complete len:415 (+),score=100.67,Ldh_1_N|PF00056.19|2.7e-46,Ldh_1_N|PF00056.19|2.5e+03,Ldh_1_C|PF02866.14|6.6e-45 S_Transcript_266403:263-1507(+)
ATGGCATTGGCAGCTCAAGCAGCAACTACTTGTTCAATTGGATCTCCTTATGTTAGCCCTAAAGCCAACCTTCCTTGTCAGACAAAATCTTTCAGTCTGAAGTATAATTCACAAAACCCCCTTAGATATTTTAGTGGCCTCAAGGCAGCCAATGGGGTAACTTCTGAATCAGAGACATCGTATTTAGGCAAGGAAAGTATTGCAGCTCTGACAGGTACTTCTGCTCCAAAATCACAAAAATATAGCCGGATTTCCCAATATCGCTTAAACCCCCAAGCATCATCTTACAAAGTGGCTATCCTTGGTGCTGCTGGGGGGATTGGCCAGCCTCTATCACTTCTGATCAAAATGTCTCCATTAGTTTCAGACATACATCTTTATGATATAGCCAATGTTAAGGGAGTTACTGCAGACCTCTGTCACTGCAACACACCAGCTCAGGTCCGTAGTTTTACTGGGACTGCTGAGCTGGCCAATTCTTTGACAGGGGTAGATGTTGTCGTTATCCCAGCAGGGGTCCCACGAAAGCCTGGTATGGCTCGGGATGACCTGTTCAATGTTAATGCCAGCATTGTCAAGAGTTTGATTGAAGCGGTCGCTGACAATTGCCCTCGAGCATTCATTCATATCATCACCAACCCGGTGAACTCCACAGTGCCTATTGCAGCTGAAGTGCTCAAGCAGAAGGGTGTTTATGACCCGAAGAAGCTCTTTGGGGTCACCACATTGGATGTCGTCAGGTCAAACACATTTGTTGCTCAGAAGAAGAAGTTGAGGCTTATCGATGTTGATGTCCCAGTAGTGGGAGGGCATGCTGGAATTACCACATTACCCCTCTTGTCAAAGACAAGGCCATCAGTGACTTTCAATGATGAGGAAGTGGAGGAGCTGACGGTGAAAATCCAAAATGCAGGGACAGAAGTGGTGGAGGCAAAGGCAGGTGCAGGTTCTGCAACGCTATCAATGGCTTATGCTGCAGCAAGATTCGTGGAGTCATCATTGAGGGCTTTGGATGGAGATTCAGATGTTTATGAATGTGCTTATGTAGAATCAGATCTGTCAGATGTTCCTTTCTTTGCATCACGCGTTAAGCTTGGAAAGAAAGGTGTTGAAGCTCTGATCTCTTCGGATTTACAGGGACTGACCGATTATGAAACCAAGGCTTTGGAGGCTCTAAAGCCTGAGCTTAAAGCTAGCATTGAAAAAGGAGTGGCTTTTGTGCAGAAGCAACCAGTAGCTGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_266403.p1 GENE.S_Transcript_266403~~S_Transcript_266403.p1 ORF type:complete len:415 (+),score=100.67,Ldh_1_N|PF00056.19|2.7e-46,Ldh_1_N|PF00056.19|2.5e+03,Ldh_1_C|PF02866.14|6.6e-45 S_Transcript_266403:263-1507(+)
MALAAQAATTCSIGSPYVSPKANLPCQTKSFSLKYNSQNPLRYFSGLKAANGVTSESETSYLGKESIAALTGTSAPKSQKYSRISQYRLNPQASSYKVAILGAAGGIGQPLSLLIKMSPLVSDIHLYDIANVKGVTADLCHCNTPAQVRSFTGTAELANSLTGVDVVVIPAGVPRKPGMARDDLFNVNASIVKSLIEAVADNCPRAFIHIITNPVNSTVPIAAEVLKQKGVYDPKKLFGVTTLDVVRSNTFVAQKKKLRLIDVDVPVVGGHAGITTLPLLSKTRPSVTFNDEEVEELTVKIQNAGTEVVEAKAGAGSATLSMAYAAARFVESSLRALDGDSDVYECAYVESDLSDVPFFASRVKLGKKGVEALISSDLQGLTDYETKALEALKPELKASIEKGVAFVQKQPVAA*

Click here to download the sequence:
Link to NCBI Protein BLAST