Transcript Information: S_Transcript_26657.p1


Annotated TAIR IDAT1G64860.1
Annotated Gene Namesigma factor A
Annotated Gene Symbol(s)SIGA, SIG1, SIG2, SIGB, RPOD1
Annotation TypeHomolog
Chromosome Positionchr1:24098497-24100746 | Forward length=502
E-Value1E-138
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.834599992678
Replicate 220.128265212179
Replicate 327.567847674025
Condition 2: 8 Hour
Replicate 116.294557110795
Replicate 211.069161017986
Replicate 39.6121567488016
Condition 3: 24 Hour
Replicate 145.833210663981
Replicate 230.281501897416
Replicate 336.858937544011


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_26657.p1 GENE.S_Transcript_26657~~S_Transcript_26657.p1 ORF type:complete len:479 (+),score=99.43,Sigma70_r3|PF04539.12|0.026,Sigma70_r3|PF04539.12|2.3e-12,Sigma70_r2|PF04542.10|1.4e-16 S_Transcript_26657:179-1615(+)
ATGATGGCTACAGCTGCTGTCGTTGGACTAAGCGCTGGGAAAAGGCTTTTGAGTTCGTCTTTCTATTATTCTGATCTCTCCGAAAAGCTCTCCTACACGAGTGAGCAACATCAAACAGTTTTGGCGAAGAATGTGATTGTTGCAAAGAAGACCTCGAATTATGCAGGAAGTTTTCAATCCAGTGGACAGAAAGAATCATCTATTAAGGCGCTTAAGGAATGTGCAGATGGAGCTACTGCTTCTCCAACGGCTGGACCCTGGATTAGTCCCAGCCCTTTAGAGGATGAAAGCTTCGAGCCAGAGACTTCAGTGGAGGCACTCCTTTTGCTTCAGAAGTCTATGTTGGAAAAGCAGTTGGAGCTTTCATTTGAACGTACTGGTATAAATGAGAAATCTAGAGGGAAGACTCGAAAAGAAATGCATGTTACATCTTCAGGGATACCTGCTCGATTACGAAGGATGAACTCCAGGAAGAGAGCTCAGAGCAAAAGCTTCTCTGTGAAGCAAAGTGGGAAAGAGATGGCTACTGTAAGCCCGGAGCTGCTTCAGAATCGTCTTGTTGGCTATGTGAGGGGTGTGACAAGTGATGAATTGCTGACTCATGGCCAAGTTGTGAGCTTATCTCGAAAGATAAAAACCGGTCTTTCCTTGGAGGAGCATAGATCAAGATTGAAGGAAAGACTAGGGTGTGAACCTTCTGAGGAGCAACTTGCAGTGTCCTTAAAAATGACCCGTGCTGAATTAAGGGCCAAGTTGATTGAGTGCACGCTGGCAAGAGAGAAGCTAGCTATGAGCAATGTTCGCTTGGTCATGTCAATTGCTCAGAAGTATGAGAACATGGGTGCTGATATGGCCGACCTCGTGCAGGGAGGACTCATTGGACTGCTACGGGGAATTGAGAAGTTTGATTCCTCCAAGGGCTTCAAAATTTCAACATATGTTTACTGGTGGATACGTCAGGGTGTGTCAAGAGCATTGGTGGAGAATTCAAGAACTCTGAGGTTGCCAACTCACCTACATGAAAGACTAAGTTTAATTCGCAATGCCAAAAATAGACTGGAAGAGAAGGGGATAACTCCATCTGTTGATAGAATAGCAGAATCCTTGAACATGTCTCATAAGAAAATTAAGAATGCAACAGAGGCTGTCAGATCTGTTTTCTCACTAGATAGAGAAGCATTCCCCTCTTTGAATGGGCTACCAGGGGAGACTTATCACAGTTACATCGCGGATAACCACCTTGAGAACAACCCGTGGCATGGTGTAGATGAATGGACACTTAAGGTAATTGACATTGAACTGTACTCTCCATTTGTTTTCCCTGGAAAAAGTCCTGCTTACTCTATCGTCTTTCCATTTGGTGGTACATGTATAACTTTCATTTTGAACAAATACAAAAAAATGGGAAAGTTTCTTCAATTTTGTCTTCTCAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_26657.p1 GENE.S_Transcript_26657~~S_Transcript_26657.p1 ORF type:complete len:479 (+),score=99.43,Sigma70_r3|PF04539.12|0.026,Sigma70_r3|PF04539.12|2.3e-12,Sigma70_r2|PF04542.10|1.4e-16 S_Transcript_26657:179-1615(+)
MMATAAVVGLSAGKRLLSSSFYYSDLSEKLSYTSEQHQTVLAKNVIVAKKTSNYAGSFQSSGQKESSIKALKECADGATASPTAGPWISPSPLEDESFEPETSVEALLLLQKSMLEKQLELSFERTGINEKSRGKTRKEMHVTSSGIPARLRRMNSRKRAQSKSFSVKQSGKEMATVSPELLQNRLVGYVRGVTSDELLTHGQVVSLSRKIKTGLSLEEHRSRLKERLGCEPSEEQLAVSLKMTRAELRAKLIECTLAREKLAMSNVRLVMSIAQKYENMGADMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKNRLEEKGITPSVDRIAESLNMSHKKIKNATEAVRSVFSLDREAFPSLNGLPGETYHSYIADNHLENNPWHGVDEWTLKVIDIELYSPFVFPGKSPAYSIVFPFGGTCITFILNKYKKMGKFLQFCLLK*

Click here to download the sequence:
Link to NCBI Protein BLAST