Transcript Information: S_Transcript_266574.p1


Annotated TAIR IDAT5G14080.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4543265-4545256 | Reverse length=634
E-Value3.3E-214
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.078273533044649
Replicate 20.22711695132736
Replicate 30.43394673137884
Condition 2: 8 Hour
Replicate 10.68993909849548
Replicate 20.65799554822725
Replicate 30.7836708678302
Condition 3: 24 Hour
Replicate 10.28912345796375
Replicate 20.26663307736879
Replicate 30.25963869240561


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_266574.p1 GENE.S_Transcript_266574~~S_Transcript_266574.p1 ORF type:5prime_partial len:680 (+),score=113.59,PPR_2|PF13041.2|72,PPR_2|PF13041.2|9.9e+02,PPR_2|PF13041.2|3.1e-05,PPR_2|PF13041.2|2.2e-05,PPR_2|PF13041.2|0.87,PPR_2|PF13041.2|6e-11,PPR_2|PF13041.2|1.6e-10,PPR_2|PF13041.2|8.8e-12,PPR_2|PF13041.2|9.1e+03,PPR_2|PF13041.2|7e+03,PPR_1|PF12854.3|2.3e+03,PPR_1|PF12854.3|0.00038,PPR_1|PF12854.3|0.037,PPR_1|PF12854.3|9.5e+02,PPR_1|PF12854.3|0.0031,PPR_1|PF12854.3|7.7e-05,PPR_1|PF12854.3|0.00097,PPR_1|PF12854.3|2.5e-07,PPR_1|PF12854.3|2.5e+02,PPR_1|PF12854.3|4.2e+03,PPR|PF01535.16|1.1e+03,PPR|PF01535.16|6.2e+03,PPR|PF01535.16|2.9e-05,PPR|PF01535.16|1.9,PPR|PF01535.16|8.1e+03,PPR|PF01535.16|9.3e+02,PPR|PF01535.16|3.9e-06,PPR|PF01535.16|0.0075,PPR|PF01535.16|0.00046,PPR|PF01535.16|0.017,PPR|PF01535.16|1.4e+04,PPR|PF01535.16|8.2e+03,PPR_3|PF13812.2|3.3e+03,PPR_3|PF13812.2|3.9e+03,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|2.9e+02,PPR_3|PF13812.2|0.053,PPR_3|PF13812.2|3.9e+02,PPR_3|PF13812.2|2.3e-05,PPR_3|PF13812.2|17,PPR_3|PF13812.2|4.3e+03,PPR_3|PF13812.2|9e+02,PPR_3|PF13812.2|1e+03 S_Transcript_266574:1-2040(+)
TTACTCTCTTCCCGGGCATTTCCTCTGTGTTTGCAACCACACTCTCGCATGAGACCTCCGGTGAACCAATCAGCGACCTTCATAAGCCGAGCTCTAATCTCAGCTTCAACCACCTCGAAACAGACCGGGTCATGGACTCAGTCACTCGAACAAACCCTTCACCAACTCGGTTGCCGTGACTCTCTAACCCCATCACTAGTAGCCCAAGTCATTGACCCTCATCTTCTTCACTACCCCTCTCTTTCTCTTGGTTTCTTCAACTGGGCATCCCAACAACCCAATTTCTCTCACTGCTCCATTTCCTACCACTCTGTGCTCAAATCCCTTTCCATTTCCCGCCAATTCAACCCCTTGGAGAAGCTCCTTAGAGAGGCCAAATCTCGAAACATTGCCATTGATCCTTCCTTTTACCGACATGTGATTCGGTCTCCAATCAAGTCGAAGAGAACCCATGAAGCTTTCTTGCTTCTGAATGAAGGTTTCTCGTCGATTTCTGATGTGGGTTTCGATGTTTGTAACTCTCTCCTTGCTGGGTTGGTGTCTGAGGGGCGCGTCGATTGTGCACGCAAGTTGTTCGACGAAATGCTTGTGAGAGGTGTGAGTTTGGGTACTCTTGGATTTGGGTTGTTTATGTGGAGGTTGTGTATAACCGCTCAATTGGGTCAAGTGTTGGGTGTGTTGGATAAAGTTAGGGAAGGTGTTTGTGGGTTCAATGGGTCGATAGTTGCCCTTCTGATAGTTCATGGGCTATGCGAAGTGGGGAGAGTGTCTGAAGCGTATGGCGCGTTGGAGGAGTTGAGGAACCGCAGTTGTAAGCCTGATTTTATGGCCTATAGGATTGTTGTGGAGGCTTTTAGGTCGAAGGGACCAGGGTGTATTTTCGAGGTGCAAATGGTGTTGAAGAAGAAAAGGAAGTTGGGAGTGGCTCCTAGGGCTAGTGACTATAAAGAGTTCATACTTGCCTTGATTGCGGAAAATCTACTTTTTGAAGCCAAAAAGTTGGGGCAAGTGATCGTTGAAGGGGATTTTTCTGTTGAAGATGATGTTTTGAATGCTTTGATAGGGTCAGTAGTGATGGTTGATCCATGTTCAGCTATGATGTTTTTCAAGTTCATGGTAGGAAAAGAAAGAAGGCCAACTCTACTTGCCTTAAGTAATTTGAGTAGATACCTCTACAAACATGATAAAGCTGATGATATGTTGGAAGTTTTCGAGACACTGTCTTCTAAGGACTATTTTACAAACTTAGAGAGCTACGGTGTTATGTTTTCGTCATTGTGCATGTCTGGTAGAGTAAGAGAAGCTTATGGGGTTCTTCAGGAGATGAGGAAGAAAGGTCTGAATCCTGATACCTCGTTTTATAATGTTCTTATGGAAGCCTTATGCAATGAAGATCTTCTCCGTCCTGCAAAGAAGCTTTGGGATGAAATGTTTGCCTATGGTGTCAAAGGGAACTTGAAGACTTATAACATTCTTATTAAGAAGCTTGCAGAGACAGGTCTTCTTGATGATTCACAGCAACTTTTTCATCACATGTTACAGAAAGGCATAATGCCTGATGCAGCTACGTATACTTCTCTTCTCGAAGGTCTCTGTCAAGACTCAAAAATTGAAGCTGCAATTCAGGTTTTTTACAAGGCCACTGATCAGGATACGAAAGTAGCACATACTTTATTCAATCCATTGGTTCTATTCCTCTGTAAAGGAGGTCATTTCCTGTCTGCTTCTAGATTCTTGTGCAGTAATTGTCATCTGGGACATCCAGAGTCCCATGCTATTTTGTTGAAATATCTGGCTGAATCTAAAGACGTTCAAACTCCCATCAACCACCTGAAACAGGTCATGGCTGTTTCACCTTCTCTGCTGCAACAGATATGTACCGAAATTTTTTCACTGCTTTCCTCGTCTCCGAATCCAGAGCCAATTCTACAGTTGCTTCGAGAGATGCAACACAATGAATCCACTTCCATGAATGATACTTGGAGAGATTTTTGTGGGCAGTTCTTGAAATGGGTTTCAGGAGCTAATCATACTTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_266574.p1 GENE.S_Transcript_266574~~S_Transcript_266574.p1 ORF type:5prime_partial len:680 (+),score=113.59,PPR_2|PF13041.2|72,PPR_2|PF13041.2|9.9e+02,PPR_2|PF13041.2|3.1e-05,PPR_2|PF13041.2|2.2e-05,PPR_2|PF13041.2|0.87,PPR_2|PF13041.2|6e-11,PPR_2|PF13041.2|1.6e-10,PPR_2|PF13041.2|8.8e-12,PPR_2|PF13041.2|9.1e+03,PPR_2|PF13041.2|7e+03,PPR_1|PF12854.3|2.3e+03,PPR_1|PF12854.3|0.00038,PPR_1|PF12854.3|0.037,PPR_1|PF12854.3|9.5e+02,PPR_1|PF12854.3|0.0031,PPR_1|PF12854.3|7.7e-05,PPR_1|PF12854.3|0.00097,PPR_1|PF12854.3|2.5e-07,PPR_1|PF12854.3|2.5e+02,PPR_1|PF12854.3|4.2e+03,PPR|PF01535.16|1.1e+03,PPR|PF01535.16|6.2e+03,PPR|PF01535.16|2.9e-05,PPR|PF01535.16|1.9,PPR|PF01535.16|8.1e+03,PPR|PF01535.16|9.3e+02,PPR|PF01535.16|3.9e-06,PPR|PF01535.16|0.0075,PPR|PF01535.16|0.00046,PPR|PF01535.16|0.017,PPR|PF01535.16|1.4e+04,PPR|PF01535.16|8.2e+03,PPR_3|PF13812.2|3.3e+03,PPR_3|PF13812.2|3.9e+03,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|2.9e+02,PPR_3|PF13812.2|0.053,PPR_3|PF13812.2|3.9e+02,PPR_3|PF13812.2|2.3e-05,PPR_3|PF13812.2|17,PPR_3|PF13812.2|4.3e+03,PPR_3|PF13812.2|9e+02,PPR_3|PF13812.2|1e+03 S_Transcript_266574:1-2040(+)
LLSSRAFPLCLQPHSRMRPPVNQSATFISRALISASTTSKQTGSWTQSLEQTLHQLGCRDSLTPSLVAQVIDPHLLHYPSLSLGFFNWASQQPNFSHCSISYHSVLKSLSISRQFNPLEKLLREAKSRNIAIDPSFYRHVIRSPIKSKRTHEAFLLLNEGFSSISDVGFDVCNSLLAGLVSEGRVDCARKLFDEMLVRGVSLGTLGFGLFMWRLCITAQLGQVLGVLDKVREGVCGFNGSIVALLIVHGLCEVGRVSEAYGALEELRNRSCKPDFMAYRIVVEAFRSKGPGCIFEVQMVLKKKRKLGVAPRASDYKEFILALIAENLLFEAKKLGQVIVEGDFSVEDDVLNALIGSVVMVDPCSAMMFFKFMVGKERRPTLLALSNLSRYLYKHDKADDMLEVFETLSSKDYFTNLESYGVMFSSLCMSGRVREAYGVLQEMRKKGLNPDTSFYNVLMEALCNEDLLRPAKKLWDEMFAYGVKGNLKTYNILIKKLAETGLLDDSQQLFHHMLQKGIMPDAATYTSLLEGLCQDSKIEAAIQVFYKATDQDTKVAHTLFNPLVLFLCKGGHFLSASRFLCSNCHLGHPESHAILLKYLAESKDVQTPINHLKQVMAVSPSLLQQICTEIFSLLSSSPNPEPILQLLREMQHNESTSMNDTWRDFCGQFLKWVSGANHTS*

Click here to download the sequence:
Link to NCBI Protein BLAST