Transcript Information: S_Transcript_26658.p1


Annotated TAIR IDAT1G64860.1
Annotated Gene Namesigma factor A
Annotated Gene Symbol(s)SIGA, SIG1, SIG2, SIGB, RPOD1
Annotation TypeHomolog
Chromosome Positionchr1:24098497-24100746 | Forward length=502
E-Value1E-83
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 164.73836817322
Replicate 2107.46313790093
Replicate 3115.16348964563
Condition 2: 8 Hour
Replicate 154.631336992206
Replicate 258.380470186253
Replicate 347.182269417768
Condition 3: 24 Hour
Replicate 1152.17784004684
Replicate 2110.26326306245
Replicate 3117.82095462278


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_26658.p1 GENE.S_Transcript_26658~~S_Transcript_26658.p1 ORF type:complete len:356 (+),score=80.90,Sigma70_r2|PF04542.10|1.7e-15 S_Transcript_26658:52-1119(+)
ATGATGGCTACAGCTGCTGTCGTTGGACTAAGCGCTGGGAAAAGGCTTTTGAGTTCGTCTTTCTATTATTCTGATCTCTCCGAAAAGCTCTCCTACACGAGTGAGCAACATCAAACAGTTTTGGCGAAGAATGTGATTGTTGCAAAGAAGACCTCGAATTATGCAGGAAGTTTTCAATCCAGTGGACAAAAAGAATCATCCATTAAGGCGCTTAAGGAATGTGCAGATGGAGCTACTGCTTCTCCAACGGCTGGACCCTGGATTAGTCCCAGCCCTTTAGAGGATGAAAGCTTCGAGCCCGAGACTTCAGTGGAGGCGCTCCTTTTGCTTCAGAAGTCTATGTTGGAAAAGCAGTTGGAGCTTTCATTTGAACGTACTGGTATAAATGAGAAATCTAGAGGGAAGACTCGAAAAGAAATGCATGTTACATCTTCAGGGATACCTGCTCGATTACGAAGGATGAACTCCAGGAAGAGAGCTCAGAGCAAAAGCTTCTCTGTGAAGCAAAGTGGGAAAGAGATGGCTACTGTAAGCCCGGAGCTGCTTCAGAATCGTCTTGTTGGCTATGTGAGGGGTGTGACAAGTGATGAATTGCTGACTCATGGCCAAGTTGTGAGCTTATCTCGAAAGATAAAAACCGGTCTTTCCTTGGAGGAGCATAGATCAAGATTGAAGGAAAGACTAGGGTGTGAACCTTCTGAGGAGCAACTTGCAGTGTCCTTAAAAATGACCCGTGCTGAATTAAGGGCCAAGTTGATTGAGTGCACGCTGGCAAGAGAGAAGCTAGCTATGAGCAATGTTCGCTTGGTCATGTCAATTGCTCAGAAGTATGAGAACATGGGTGCTGATATGGCCGACCTCGTGCAGGGAGGACTCATTGGACTGCTACGGGGAATTGAGAAGTTTGATTCCTCCAAGGGCTTCAAAATTTCAACATATGTTTACTGGTGGATACGTCAGGTAAGTGAAGTATCCATGTTGTTTATGCAGCCAGATAAATCTGCAGCCCACTGTTATGCAGCTTTGCCTGGGCATAATCTGCTTTCTGGTTTAGTTGTCGGATGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_26658.p1 GENE.S_Transcript_26658~~S_Transcript_26658.p1 ORF type:complete len:356 (+),score=80.90,Sigma70_r2|PF04542.10|1.7e-15 S_Transcript_26658:52-1119(+)
MMATAAVVGLSAGKRLLSSSFYYSDLSEKLSYTSEQHQTVLAKNVIVAKKTSNYAGSFQSSGQKESSIKALKECADGATASPTAGPWISPSPLEDESFEPETSVEALLLLQKSMLEKQLELSFERTGINEKSRGKTRKEMHVTSSGIPARLRRMNSRKRAQSKSFSVKQSGKEMATVSPELLQNRLVGYVRGVTSDELLTHGQVVSLSRKIKTGLSLEEHRSRLKERLGCEPSEEQLAVSLKMTRAELRAKLIECTLAREKLAMSNVRLVMSIAQKYENMGADMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQVSEVSMLFMQPDKSAAHCYAALPGHNLLSGLVVGW*

Click here to download the sequence:
Link to NCBI Protein BLAST