Transcript Information: S_Transcript_26662.p1


Annotated TAIR IDAT1G64860.1
Annotated Gene Namesigma factor A
Annotated Gene Symbol(s)SIGA, SIG1, SIG2, SIGB, RPOD1
Annotation TypeOrtholog
Chromosome Positionchr1:24098497-24100746 | Forward length=502
E-Value3.6E-221
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 191.183988295837
Replicate 2120.55424652642
Replicate 3130.09109257376
Condition 2: 8 Hour
Replicate 162.616783520825
Replicate 259.985076233211
Replicate 356.601643142311
Condition 3: 24 Hour
Replicate 1141.25197571807
Replicate 2119.41390760844
Replicate 3134.60130868786


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_26662.p1 GENE.S_Transcript_26662~~S_Transcript_26662.p1 ORF type:complete len:502 (+),score=105.45,Sigma70_r3|PF04539.12|0.027,Sigma70_r3|PF04539.12|2.5e-12,Sigma70_r3|PF04539.12|17,Sigma70_r2|PF04542.10|1.5e-16,Sigma70_r4|PF04545.12|1.6e+03,Sigma70_r4|PF04545.12|2.9e-11 S_Transcript_26662:179-1684(+)
ATGATGGCTACAGCTGCTGTCGTTGGACTAAGCGCTGGGAAAAGGCTTTTGAGTTCGTCTTTCTATTATTCTGATCTCTCCGAAAAGCTCTCCTACACGAGTGAGCAACATCAAACAGTTTTGGCGAAGAATGTGATTGTTGCAAAGAAGACCTCGAATTATGCAGGAAGTTTTCAATCCAGTGGACAGAAAGAATCATCTATTAAGGCGCTTAAGGAATGTGCAGATGGAGCTACTGCTTCTCCAACGGCTGGACCCTGGATTAGTCCCAGCCCTTTAGAGGATGAAAGCTTCGAGCCAGAGACTTCAGTGGAGGCACTCCTTTTGCTTCAGAAGTCTATGTTGGAAAAGCAGTTGGAGCTTTCATTTGAACGTACTGGTATAAATGAGAAATCTAGAGGGAAGACTCGAAAAGAAATGCATGTTACATCTTCAGGGATACCTGCTCGATTACGAAGGATGAACTCCAGGAAGAGAGCTCAGAGCAAAAGCTTCTCTGTGAAGCAAAGTGGGAAAGAGATGGCTACTGTAAGCCCGGAGCTGCTTCAGAATCGTCTTGTTGGCTATGTGAGGGGTGTGACAAGTGATGAATTGCTGACTCATGGCCAAGTTGTGAGCTTATCTCGAAAGATAAAAACCGGTCTTTCCTTGGAGGAGCATAGATCAAGATTGAAGGAAAGACTAGGGTGTGAACCTTCTGAGGAGCAACTTGCAGTGTCCTTAAAAATGACCCGTGCTGAATTAAGGGCCAAGTTGATTGAGTGCACGCTGGCAAGAGAGAAGCTAGCTATGAGCAATGTTCGCTTGGTCATGTCAATTGCTCAGAAGTATGAGAACATGGGTGCTGATATGGCCGACCTCGTGCAGGGAGGACTCATTGGACTGCTACGGGGAATTGAGAAGTTTGATTCCTCCAAGGGCTTCAAAATTTCAACATATGTTTACTGGTGGATACGTCAGGGTGTGTCAAGAGCATTGGTGGAGAATTCAAGAACTCTGAGGTTGCCAACTCACCTACATGAAAGACTAAGTTTAATTCGCAATGCCAAAAATAGACTGGAAGAGAAGGGGATAACTCCATCTGTTGATAGAATAGCAGAATCCTTGAACATGTCTCATAAGAAAATTAAGAATGCAACAGAGGCTGTCAGATCTGTTTTCTCACTAGATAGAGAAGCATTCCCCTCTTTGAATGGGCTACCAGGGGAGACTTATCACAGTTACATCGCGGATAACCACCTTGAGAACAACCCGTGGCATGGTGTAGATGAATGGACACTTAAGCGTGAAGTAAACAGTCTAATAGTCACAACACTCAGGGAACGAGAGCAAGATATAATACGTCTTTATTATGGTCTTGATGACGAGTGTCTCACTTGGGAAGAAATTAGCAAAAGGATTGGTTTGTCAAGAGAACGAGTCAGACAGGTTGGACTTGTTGCACTGGAGAAACTAAAGAATGCTGCAAGAAAGCGAAAGATGGAAGCTTTGCTGGTAAAACACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_26662.p1 GENE.S_Transcript_26662~~S_Transcript_26662.p1 ORF type:complete len:502 (+),score=105.45,Sigma70_r3|PF04539.12|0.027,Sigma70_r3|PF04539.12|2.5e-12,Sigma70_r3|PF04539.12|17,Sigma70_r2|PF04542.10|1.5e-16,Sigma70_r4|PF04545.12|1.6e+03,Sigma70_r4|PF04545.12|2.9e-11 S_Transcript_26662:179-1684(+)
MMATAAVVGLSAGKRLLSSSFYYSDLSEKLSYTSEQHQTVLAKNVIVAKKTSNYAGSFQSSGQKESSIKALKECADGATASPTAGPWISPSPLEDESFEPETSVEALLLLQKSMLEKQLELSFERTGINEKSRGKTRKEMHVTSSGIPARLRRMNSRKRAQSKSFSVKQSGKEMATVSPELLQNRLVGYVRGVTSDELLTHGQVVSLSRKIKTGLSLEEHRSRLKERLGCEPSEEQLAVSLKMTRAELRAKLIECTLAREKLAMSNVRLVMSIAQKYENMGADMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKNRLEEKGITPSVDRIAESLNMSHKKIKNATEAVRSVFSLDREAFPSLNGLPGETYHSYIADNHLENNPWHGVDEWTLKREVNSLIVTTLREREQDIIRLYYGLDDECLTWEEISKRIGLSRERVRQVGLVALEKLKNAARKRKMEALLVKH*

Click here to download the sequence:
Link to NCBI Protein BLAST