Transcript Information: S_Transcript_266701.p1


Annotated TAIR IDAT5G26780.3
Annotated Gene Nameserine hydroxymethyltransferase 2
Annotated Gene Symbol(s)SHM2
Annotation TypeHomolog
Chromosome Positionchr5:9418299-9421725 | Forward length=533
E-Value1E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.2333552902556
Replicate 22.0619429493004
Replicate 32.2407062531477
Condition 2: 8 Hour
Replicate 11.9930271324423
Replicate 23.5544058586481
Replicate 32.7889894062592
Condition 3: 24 Hour
Replicate 12.2457356859489
Replicate 22.3299245545778
Replicate 31.6500402881852


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_266701.p1 GENE.S_Transcript_266701~~S_Transcript_266701.p1 ORF type:3prime_partial len:107 (+),score=6.91 S_Transcript_266701:97-414(+)
ATGCAAAGGAATTTTCACGTTTTCCTTCATGTTATATACAGAGCAAACTGTCTTAAATTATGTGTACATTTCAAGACCTCTTTAAGTGAACCATTTAATTCCAGATCTCCCAAGTCTCAACCAAACCAGGAGACATTCATCAGTAGGTTGAAAGTAAACGAAATTTCAAAGCATGTGGTGCTGATTATGTCAAATTATGGAAACCATAAACAAGACTCATCTTCACCTTGTTTTTCAAGTTCACTAAGACTAAATGATTCTCTGTTCCACCAGAAACAAGTTCGTAGCCCAACCCTGCCAAAGCCTACAAGAACAGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_266701.p1 GENE.S_Transcript_266701~~S_Transcript_266701.p1 ORF type:3prime_partial len:107 (+),score=6.91 S_Transcript_266701:97-414(+)
MQRNFHVFLHVIYRANCLKLCVHFKTSLSEPFNSRSPKSQPNQETFISRLKVNEISKHVVLIMSNYGNHKQDSSSPCFSSSLRLNDSLFHQKQVRSPTLPKPTRTA

Click here to download the sequence:
Link to NCBI Protein BLAST