Transcript Information: S_Transcript_267229.p3


Annotated TAIR IDAT1G77360.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:29071983-29073536 | Reverse length=517
E-Value1.1E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.28616130360409
Replicate 20
Replicate 30.39661798029249
Condition 2: 8 Hour
Replicate 10.45861054445447
Replicate 20.24055751225513
Replicate 30.45840532483831
Condition 3: 24 Hour
Replicate 10.23489122032897
Replicate 20.4873937973408
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_267229.p3 GENE.S_Transcript_267229~~S_Transcript_267229.p3 ORF type:5prime_partial len:93 (-),score=21.18,PPR_2|PF13041.2|3e-08,PPR_2|PF13041.2|1.8e-13,PPR_2|PF13041.2|0.86,PPR_1|PF12854.3|13,PPR_1|PF12854.3|2.4e-13,PPR_1|PF12854.3|2.4e-05,PPR|PF01535.16|0.73,PPR|PF01535.16|3.9e-08,PPR|PF01535.16|0.0023,PPR_3|PF13812.2|10,PPR_3|PF13812.2|3.1e-05,PPR_3|PF13812.2|53 S_Transcript_267229:710-988(-)
AGGGAACCAAATCTACCCAAGGCAAGAGAGATCTTTAGGCAAATGGTTGATGATGGTTGCAATCCTGATATTGTGACTTATGGTATAATGGTGGACATTCTTTGTAAGGCAGGGAGAGTTGATGAAGCTGTTGACGTTGTTAAGAGTATGGATGCTAGTGGTTGTAGGCCAACATCTTTCATCTATAGTATTCTGGTTCATACCTATGGGGTTGAGAATCGGATTGAAGATGCCATAGATACATTCTTGGAAATGGCAAAAAAATGGTGTAGTGGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_267229.p3 GENE.S_Transcript_267229~~S_Transcript_267229.p3 ORF type:5prime_partial len:93 (-),score=21.18,PPR_2|PF13041.2|3e-08,PPR_2|PF13041.2|1.8e-13,PPR_2|PF13041.2|0.86,PPR_1|PF12854.3|13,PPR_1|PF12854.3|2.4e-13,PPR_1|PF12854.3|2.4e-05,PPR|PF01535.16|0.73,PPR|PF01535.16|3.9e-08,PPR|PF01535.16|0.0023,PPR_3|PF13812.2|10,PPR_3|PF13812.2|3.1e-05,PPR_3|PF13812.2|53 S_Transcript_267229:710-988(-)
REPNLPKAREIFRQMVDDGCNPDIVTYGIMVDILCKAGRVDEAVDVVKSMDASGCRPTSFIYSILVHTYGVENRIEDAIDTFLEMAKKWCSG*

Click here to download the sequence:
Link to NCBI Protein BLAST