Transcript Information: S_Transcript_267281.p1


Annotated TAIR IDAT1G45474.1
Annotated Gene Namephotosystem I light harvesting complex gene 5
Annotated Gene Symbol(s)LHCA5
Annotation TypeHomolog
Chromosome Positionchr1:17179353-17180439 | Forward length=256
E-Value4E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.81261072473833
Replicate 23.1157374565956
Replicate 30.70392122456491
Condition 2: 8 Hour
Replicate 10.40697309765521
Replicate 20
Replicate 30.81358196965578
Condition 3: 24 Hour
Replicate 10.083377417903031
Replicate 23.2006146119269
Replicate 31.0589407956346


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_267281.p1 GENE.S_Transcript_267281~~S_Transcript_267281.p1 ORF type:complete len:262 (+),score=18.79,Chloroa_b-bind|PF00504.17|1.2e-43 S_Transcript_267281:57-788(+)
ATGGCGACCGCAATGTCAACCCGCACGCCGCTGAGCCTGAAGCCCGTGGTGGCTGTGCGACGCTCGGTGGCAGCAAATGCTGCAGCCGGCGGCCGGCCGCTGTGGCTTCCAGGCAGCACGCCGCCAAAGCACCTCGATGGCAGCATGCCTGCCGACTATGGCTTTGACCCCCTCAACCTCGGTGTTGACAAGAACAGCCTGGAGTGGTACAAGCAGGCTGAGATCTTTCATTGCCGGCTCGCAATGGCCGCAGTCGCAGGCATCCTCATTCCAGGCGCGCTGGTCCCCGGCTTTGCGCAGTGGTTCGATGCGGGCAAGGTGGCGCTGCAGGGCAGTCCCTTCCCGTACAGCACCCTCCTCGCCATCGAGCTCTTCCTCTTTGGCTTCGTGGAGTGCAAGCGCTGGATGGACATCCGCAAGCCCGGCAGCCAGGGCGAGGCCGGCAGCTTCCTTGGCCTGGAGGGCATGCTCAAGGGCAGCGATGCAGGACCTGGCTATCCTGGCGGCCCCTTCAACCCAGTCGGGTTTGGCAAGGACAACATGCGCGACATGCAGGTCAAGGAGATCAAGAATGGCCGGTTGGCGATGGTAGCCTTCATTGGCTTTGTTGCACAATACGCGGCCACCGGCAAGGGTCCCCTGCAGTGCCTGGGCGATCACCTTGCAAACCCCTGGGCCAACAACTTCACCACAAACGGAATCTCCATTCCCATTCCCGAGCTTGTAAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_267281.p1 GENE.S_Transcript_267281~~S_Transcript_267281.p1 ORF type:complete len:262 (+),score=18.79,Chloroa_b-bind|PF00504.17|1.2e-43 S_Transcript_267281:57-788(+)
MATAMSTRTPLSLKPVVAVRRSVAANAAAGGRPLWLPGSTPPKHLDGSMPADYGFDPLNLGVDKNSLEWYKQAEIFHCRLAMAAVAGILIPGALVPGFAQWFDAGKVALQGSPFPYSTLLAIELFLFGFVECKRWMDIRKPGSQGEAGSFLGLEGMLKGSDAGPGYPGGPFNPVGFGKDNMRDMQVKEIKNGRLAMVAFIGFVAQYAATGKGPLQCLGDHLANPWANNFTTNGISIPIPELVK*

Click here to download the sequence:
Link to NCBI Protein BLAST