Transcript Information: S_Transcript_267408.p1


Annotated TAIR IDAT2G27900.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein sorting-associated protein 54 (InterPro:IPR019515); Has 316 Blast hits to 252 proteins in 92 species: Archae - 0; Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:11877654-11885238 | Forward length=1124
E-Value4.1E-119
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.54762936516
Replicate 218.712941928363
Replicate 315.932206564367
Condition 2: 8 Hour
Replicate 124.22832303046
Replicate 222.371848639727
Replicate 322.655063161315
Condition 3: 24 Hour
Replicate 121.158656784083
Replicate 218.510757099006
Replicate 319.939940864778


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_267408.p1 GENE.S_Transcript_267408~~S_Transcript_267408.p1 ORF type:5prime_partial len:191 (-),score=30.57,DUF2451|PF10474.5|1.7e-60 S_Transcript_267408:177-749(-)
TTTTTTGTGAATCTGGTTGATTCAGTGCCAGACCTTATAGAGCACATTCATAGAACAACTGCAAAATCACTTCTCCATATCAATGGGTATATTGATCGTATCGCTAGTTCTAAGTGGGAAGTCAAAGAGCTTGGAATGGAGCACAATGGTTATGTTGATCTGCTTTTGGGAGAATTCAAACATTACAGAACAAGACTTGCTCATGCAGGAATTCATAAGGAGATTCAAGACCTCCTATTGGAGCATGGTGTTGAAATTGTTGCAGAAACGCTTGTTGAAGGCCTATCACGTGTGAAGAGATGTACAGATGAAGGCCGGGCCCTTATGTCATTGGATCTACAGGTGTTGATTAACGGTCTTCAGCACTTCGTCTCTAAGGATGTAAAACCCAAACTACAAATAGTAGAGGCATTCATCAAGGCCTACTACCTTCCAGAAACTGAGTATGTGCATTGGGCACGGCAACACCCGGAATACAGCAAAAACCAAGTGGTAGGGCTAGTCAACCTTGTAGCAACCATGAAAGGTTGGAAAAGGAAAACAAGACTAGAAATTCTTGAAAAGATTGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_267408.p1 GENE.S_Transcript_267408~~S_Transcript_267408.p1 ORF type:5prime_partial len:191 (-),score=30.57,DUF2451|PF10474.5|1.7e-60 S_Transcript_267408:177-749(-)
FFVNLVDSVPDLIEHIHRTTAKSLLHINGYIDRIASSKWEVKELGMEHNGYVDLLLGEFKHYRTRLAHAGIHKEIQDLLLEHGVEIVAETLVEGLSRVKRCTDEGRALMSLDLQVLINGLQHFVSKDVKPKLQIVEAFIKAYYLPETEYVHWARQHPEYSKNQVVGLVNLVATMKGWKRKTRLEILEKIE*

Click here to download the sequence:
Link to NCBI Protein BLAST