Transcript Information: S_Transcript_267416.p1


Annotated TAIR IDAT5G05800.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1743234-1744751 | Reverse length=449
E-Value8E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.43260371681402
Replicate 30.54243341422355
Condition 2: 8 Hour
Replicate 10.20907245408954
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.42833104883518
Replicate 20.66658269342198
Replicate 31.236374725741


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_267416.p1 GENE.S_Transcript_267416~~S_Transcript_267416.p1 ORF type:5prime_partial len:102 (+),score=17.71,Myb_DNA-bind_3|PF12776.3|1.7e-12 S_Transcript_267416:2-307(+)
GAAGGTGGTGGTGAAATAGGGAGACAAGATAATGGAAGAGTTAAGTGGTCAAAAGAATTACTACACATTCTTTGTGATCTTTGTATTCAATATACTGAAAAAAGTAAAGAAAAACGTGGTGAGATTACTTCTCAAAGAATAGAATGGAAAAAAGTTGTTCCTGAATTTCAGAAAAAGACCAAATTGTCATGGGACAAACCAAGGCTCAAAAATAAATTAGACAACTATAAGTCATCATGGAGTCTTTGGAAACAATTGCAAGGGAAGGAGACTGGATTAGGTGGGATGCCGAAAAAGGATCACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_267416.p1 GENE.S_Transcript_267416~~S_Transcript_267416.p1 ORF type:5prime_partial len:102 (+),score=17.71,Myb_DNA-bind_3|PF12776.3|1.7e-12 S_Transcript_267416:2-307(+)
EGGGEIGRQDNGRVKWSKELLHILCDLCIQYTEKSKEKRGEITSQRIEWKKVVPEFQKKTKLSWDKPRLKNKLDNYKSSWSLWKQLQGKETGLGGMPKKDH*

Click here to download the sequence:
Link to NCBI Protein BLAST