Transcript Information: S_Transcript_267691.p1


Annotated TAIR IDAT4G19890.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:10786948-10789053 | Reverse length=701
E-Value1.1e-309
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.59972960529984
Replicate 20.2175204604262
Replicate 30.31170821549747
Condition 2: 8 Hour
Replicate 11.7120383775726
Replicate 21.8275594663439
Replicate 31.5611606696606
Condition 3: 24 Hour
Replicate 10.43074418150467
Replicate 20.35112947512651
Replicate 30.60390810547461


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_267691.p1 GENE.S_Transcript_267691~~S_Transcript_267691.p1 ORF type:complete len:710 (+),score=86.15,PPR_1|PF12854.3|5.7e+02,PPR_1|PF12854.3|0.015,PPR_1|PF12854.3|7.3e-06,PPR_1|PF12854.3|0.013,PPR_1|PF12854.3|2.4e-08,PPR_1|PF12854.3|3.1e-09,PPR_1|PF12854.3|9.3e-11,PPR_1|PF12854.3|9.9e-12,PPR_1|PF12854.3|1.3e-11,PPR_1|PF12854.3|0.00092,PPR_1|PF12854.3|2.9e-05,PPR_1|PF12854.3|6.2e-08,PPR_1|PF12854.3|5.6e-10,PPR_1|PF12854.3|0.069,PPR_2|PF13041.2|9.3e+02,PPR_2|PF13041.2|0.043,PPR_2|PF13041.2|2.2e-10,PPR_2|PF13041.2|2.3e-07,PPR_2|PF13041.2|1.8e-07,PPR_2|PF13041.2|6e-13,PPR_2|PF13041.2|0.0001,PPR_2|PF13041.2|1.8e-20,PPR_2|PF13041.2|1.6e-10,PPR_2|PF13041.2|2.7e-12,PPR_2|PF13041.2|2.6e-10,PPR_2|PF13041.2|8.5e-17,PPR_2|PF13041.2|1.8e-09,PPR_2|PF13041.2|0.5,PPR|PF01535.16|15,PPR|PF01535.16|1.6,PPR|PF01535.16|0.023,PPR|PF01535.16|1.2e-05,PPR|PF01535.16|0.0099,PPR|PF01535.16|0.00014,PPR|PF01535.16|1e-05,PPR|PF01535.16|7.7e-09,PPR|PF01535.16|1.3e-05,PPR|PF01535.16|1.3e-05,PPR|PF01535.16|9.1e-06,PPR|PF01535.16|0.0013,PPR|PF01535.16|1.4e-08,PPR|PF01535.16|2.4e-07,PPR|PF01535.16|4.7e+02,PPR|PF01535.16|0.45,PPR_3|PF13812.2|8.8e+03,PPR_3|PF13812.2|7,PPR_3|PF13812.2|0.34,PPR_3|PF13812.2|0.07,PPR_3|PF13812.2|20,PPR_3|PF13812.2|0.00047,PPR_3|PF13812.2|2.7e+02,PPR_3|PF13812.2|0.00031,PPR_3|PF13812.2|0.0013,PPR_3|PF13812.2|0.49,PPR_3|PF13812.2|0.00046,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|0.00014,PPR_3|PF13812.2|0.0096,PPR_3|PF13812.2|7.5e+02,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|1.6e+04 S_Transcript_267691:151-2280(+)
ATGTTTTCTCTCCTTCCTCTCAGATCCCAGTCGCACAAACCCAAAAGAACCATACCAATTCTCCCAAATCTCTTCACTCTCAACCCCTTTTCTCTCCACACTCACCACATTCCCATTAATCTTCAACGTTTCTACACCAACCCAATTTCAACTCCTGGACAATCCCTTGTCAAGAAAGTATCTTTACAAGTCCTCCAATCATACCACCAACAAACCCACCTAAAATTTTCACTTACCAAGCTAAACCTTGACTTAGACCTTGAATCTTTATCCCATGATAATGTTATTACGATCATTGCCTCCCTTGCTGATGAGGCTGGCTCAATGGTAGCATTAAGTTTCTTTGATTATGCAATTGGGTTTTCCAAATTTAGACACTTTATGCGCCTTTATATCGTTTTAACTACTTCTTTGATTAACAATGGCAATTTTGAAAAAGCCCATTGGGTAATGATGTGTATGGTTAGGAATTTTGCAGAAATCGGGAAGTTTAAGGAAGCTGTTAGTATGGTGATTGAGATGCATAATCAGGGTTTGAACCCAAGTTGTCATTCTTTGAATTGTATTATTGGGATTGCTTGTGAAATGGGATTAGTTGAATATGCAGATCATGTGTTCGACGAAATGTCTCAGAGAGGCGTATGTCCGGATTCTTGTAGTTATGTTACTATGATTGCGGGTTATTGTCGAAAAGGGGAGGTTTCGGAGGTAGATAAGTGGTTGAGTAGAATGATTGAGCAAAAATTTGTTGTTAATAACTCGGCTTGTACTTTGGTGATCAGCACATTTTGTTGTGTGGGTAATGTTAGTAGGGCATTTTGGTTTTTGAATAAGATGATGGAGTTGGGGTTTAGGCCGAATTTGATCAATTTCAGTGCTTTGGTAGATGGATTATGTAATAGGGGTAATATTAAGCAAGCTTTTGAAACATTGGAGGAAATGATCAGGAGAGGGTGGAAACCGAATGTGTATATGCATACAACTTTGATTAATGGACTTTGTAAGAAGGGATGGACTGAGAAGGCATTCCGGCTATTTCTTAAACTAGTAAGGAGTGATAACTATAAGCCAAATACATGTACCTATAATGCCATGATCAATGGGTATTGCAAGGATGAGAAATTGAACCGAGCAGAGATGCTATTCGGCAGAATGCAAGAGCAAGGATTAGTACCAGATGTTCACACTTACACTATCCTCGTAGATGGGCACTGTAAAGCTGGGAACTTCGGAAGAGCATATGAGTTGATGGATGTCATGACAGATGAAGGGTTTGCTCCTAATATTTGTACATACAATGCAGTTGTAAGTGGTCTCTGCAAGAAGGGAAGGTTACAGGAAGCTTATAAACTGCTTAGGGAGGGCTTTCATCAAGGACTGCTAGCTGATAGAGTCACGTACACAATTCTCATGTCTGCTTCAGCCAAGAACAACGATACTAAGGAGGCCTTGGCATGGTTTGGTAAAATGACTAAAGCAGGCTTTGAGGCTGATATATACATTTATAACATCCTGATTGCCTCTTTCTGTAGGGAAAAAAGGATGGAAGATGGTGAATGGTGGTTTCAGAAAGCAATAAAATTTCACCTTGTTCCGACTAAGGAAACTTACACCTCCATGATAAGTGGATATTGTGAGGAGGGAAATGTTGACTTGGCCAAAAAGTATTTCAGTAAGATGAGTGATCATGGTTGTCAACCAGATAGTTTTACTTATGGTTCTTTGATCAGTGGACTATGCAAACAAAGCAAACTAGAAGAGGCTCACAAGCTGTACAATGCGATGATTGACAAGGGGCTTTCCCCTTGTGAAGTGACTCGAGTAACTCTATCGTACGAGTACTGCAAAAATGATGATTCGTGCAATGCTATGGCCACCTTGGAACGGTTGGAGAAAAAGCTTTGGGTTAGGACGGTGACTACATTGATCAGGAAGCTCTGTAGTGACGGAAAAGTAGACATGGCAGCATTGTTCTTGCAGAAGTTGTTGGATATGCAGGCAAATGCTGACCGCGTGACTGTGGCAGCATTTATGACTGCATGTTACGAAAGCGACAAGTATGAGCTTGTTTCTGCTTTTTCTGAGAGGCTTTTGTTAAAGAGAGATGAAATGCATCAAAAATTGGCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_267691.p1 GENE.S_Transcript_267691~~S_Transcript_267691.p1 ORF type:complete len:710 (+),score=86.15,PPR_1|PF12854.3|5.7e+02,PPR_1|PF12854.3|0.015,PPR_1|PF12854.3|7.3e-06,PPR_1|PF12854.3|0.013,PPR_1|PF12854.3|2.4e-08,PPR_1|PF12854.3|3.1e-09,PPR_1|PF12854.3|9.3e-11,PPR_1|PF12854.3|9.9e-12,PPR_1|PF12854.3|1.3e-11,PPR_1|PF12854.3|0.00092,PPR_1|PF12854.3|2.9e-05,PPR_1|PF12854.3|6.2e-08,PPR_1|PF12854.3|5.6e-10,PPR_1|PF12854.3|0.069,PPR_2|PF13041.2|9.3e+02,PPR_2|PF13041.2|0.043,PPR_2|PF13041.2|2.2e-10,PPR_2|PF13041.2|2.3e-07,PPR_2|PF13041.2|1.8e-07,PPR_2|PF13041.2|6e-13,PPR_2|PF13041.2|0.0001,PPR_2|PF13041.2|1.8e-20,PPR_2|PF13041.2|1.6e-10,PPR_2|PF13041.2|2.7e-12,PPR_2|PF13041.2|2.6e-10,PPR_2|PF13041.2|8.5e-17,PPR_2|PF13041.2|1.8e-09,PPR_2|PF13041.2|0.5,PPR|PF01535.16|15,PPR|PF01535.16|1.6,PPR|PF01535.16|0.023,PPR|PF01535.16|1.2e-05,PPR|PF01535.16|0.0099,PPR|PF01535.16|0.00014,PPR|PF01535.16|1e-05,PPR|PF01535.16|7.7e-09,PPR|PF01535.16|1.3e-05,PPR|PF01535.16|1.3e-05,PPR|PF01535.16|9.1e-06,PPR|PF01535.16|0.0013,PPR|PF01535.16|1.4e-08,PPR|PF01535.16|2.4e-07,PPR|PF01535.16|4.7e+02,PPR|PF01535.16|0.45,PPR_3|PF13812.2|8.8e+03,PPR_3|PF13812.2|7,PPR_3|PF13812.2|0.34,PPR_3|PF13812.2|0.07,PPR_3|PF13812.2|20,PPR_3|PF13812.2|0.00047,PPR_3|PF13812.2|2.7e+02,PPR_3|PF13812.2|0.00031,PPR_3|PF13812.2|0.0013,PPR_3|PF13812.2|0.49,PPR_3|PF13812.2|0.00046,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|0.00014,PPR_3|PF13812.2|0.0096,PPR_3|PF13812.2|7.5e+02,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|1.6e+04 S_Transcript_267691:151-2280(+)
MFSLLPLRSQSHKPKRTIPILPNLFTLNPFSLHTHHIPINLQRFYTNPISTPGQSLVKKVSLQVLQSYHQQTHLKFSLTKLNLDLDLESLSHDNVITIIASLADEAGSMVALSFFDYAIGFSKFRHFMRLYIVLTTSLINNGNFEKAHWVMMCMVRNFAEIGKFKEAVSMVIEMHNQGLNPSCHSLNCIIGIACEMGLVEYADHVFDEMSQRGVCPDSCSYVTMIAGYCRKGEVSEVDKWLSRMIEQKFVVNNSACTLVISTFCCVGNVSRAFWFLNKMMELGFRPNLINFSALVDGLCNRGNIKQAFETLEEMIRRGWKPNVYMHTTLINGLCKKGWTEKAFRLFLKLVRSDNYKPNTCTYNAMINGYCKDEKLNRAEMLFGRMQEQGLVPDVHTYTILVDGHCKAGNFGRAYELMDVMTDEGFAPNICTYNAVVSGLCKKGRLQEAYKLLREGFHQGLLADRVTYTILMSASAKNNDTKEALAWFGKMTKAGFEADIYIYNILIASFCREKRMEDGEWWFQKAIKFHLVPTKETYTSMISGYCEEGNVDLAKKYFSKMSDHGCQPDSFTYGSLISGLCKQSKLEEAHKLYNAMIDKGLSPCEVTRVTLSYEYCKNDDSCNAMATLERLEKKLWVRTVTTLIRKLCSDGKVDMAALFLQKLLDMQANADRVTVAAFMTACYESDKYELVSAFSERLLLKRDEMHQKLA*

Click here to download the sequence:
Link to NCBI Protein BLAST