Transcript Information: S_Transcript_26789.p1


Annotated TAIR IDAT1G61210.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:22564785-22571555 | Forward length=1181
E-Value6.4E-201
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.368845260546
Replicate 231.315859883078
Replicate 326.467622557723
Condition 2: 8 Hour
Replicate 18.6922626325404
Replicate 28.5617035423331
Replicate 39.1353632592777
Condition 3: 24 Hour
Replicate 132.466707573177
Replicate 233.327387403226
Replicate 336.527338227593


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_26789.p1 GENE.S_Transcript_26789~~S_Transcript_26789.p1 ORF type:complete len:763 (+),score=178.42,Katanin_con80|PF13925.2|3.4e-53,WD40|PF00400.28|0.005,WD40|PF00400.28|0.0062,WD40|PF00400.28|8.4e-06,WD40|PF00400.28|1.1e-08,WD40|PF00400.28|5.9e-07,WD40|PF00400.28|5.3,eIF2A|PF08662.7|0.06,eIF2A|PF08662.7|0.0027,eIF2A|PF08662.7|68 S_Transcript_26789:308-2596(+)
ATGGCTAAACGTGGATATAAGCTCCAGGAATTTGTGGCACATTCAGCAAATGTGAATTGTCTTAGGATTGGGAAGAAGGCATGCCGGCTTCTTCTGACGGGTGGAGATGACCACAAAGTCAACTTGTGGTCCATTGGAAAGCCCACTTCTCTAATGAGCTTGTGTGGTCATACAAGTCCAGTTGAAAGTTTGGCATTTGATTCAACGGAGGTTTTGGTACTTGCTGGAGCTTCTTCTGGTACAGTGAAGTTGTGGGATCTTGAAGAGGCAAAAATGGTTAGAACTCTTGCTGGTCACAGATCCAACTGCACTTCTCTCGAATTCCATCCGTTTGGGGAGTTTTTTGCTTCGGGTTCAGCAGACACTGACCTAAAGATTTGGGATATAAGAAAGAAAGGATGCATCCACACATATAAAGGCCATAATCTTGGCATCAACACCATTAAATTCACTCCTGATGGTCGATGGGTTGTTTCTGGTGGGTTTGATAATGTTGTGAAGGTATGGGATTTGACTGCCGGAAAGTTATTGCATGATTTCAAGTTCCATGATGGTCATATCAGATCCTTAGATTTCCACCCTCTTGAGTTTCTTCTAGCCACAGGTTCTGCTGACAGAACTGTTAAGTTCTGGGACTTGGAAACTTTTGAAATGATTGGATCTTCCAGAGCAGAGGCCACAGGAGTGCGTGCAATTACTTTCCATCCTGATGGAAGGACCCTTTTTTCTGGATATGACAATAGCCTGAAGGTTCATTCATGGGAGCCTTTGATTTGCCATGATGCTGTTGACATGGGATGGTCAACACTGGGTGACCTCAGCATTAGTGAAGGAAAAGTTATTGGTTGCTCTTATTACCGAAACTCCATTGGAGTTTGGGTGGCTGATCTCTCACGTATTGAGCCATACGGAAATGGTGATGCATCTCAAGACACTAACCCTATTGACGTGAAGCTTGAGACGCGAGAAAGTCTTTCTGCGGAGAAAGTAGGGTCAAGCCCTAGGTCCAATATGGAGTCGCGTTCGACATCCCCAGATAATGATGCTAAAGATATTAAGAATATATATGTGGATTATGAGAAGCCAATCAGTTCTAAGAAAATCGGGCCACGTAGTACTTCAAGAGTGGTATCATCATTTTCTAAGGAAACCAGCAAATTGTCAGCTAAAAAGCAAAGTCCTGCTAATGCTACCCCTGGAAAATCTAATTCTCAAGCTCGTGGTAGATCTTTTGTTGTGCCAAGCTTTGTTCCAAGAGAGAGTTCTGGTAGCAAAAATTTTTCCAGTTCTAGAAGAGAGTCATTCACTCCTGCTAAGCCCAGCAGTGGAGCATCTATGAAGGCTGCTCACACAAGGAGGCCATCGAATATCAAAGATGATGTAGTTATGGAAGACACAAATTCTGCCGATAGGCTTGTATCAGAACTTGGAGCTAAGGAATTGCTTGATGATAACAACTCTACTTTGAAGAGTGTTGAAGTCAAGTCTGAAATAAATTCATCTCCTACAATATCCTTTAACCTGCAAAGTGGTGACGATTCTGCTGATTGCAAAGAGACAAAAAGTGTAAAAGTGCTTAATGGAGCGGCAGTTGCTCATGGAAGGACACGTTCGCTTGTTGAAAAGTTTGAAAGAAGGGGAAAACCTTCTTTCAGTGATGATCAAATGACCAGTACATCACCTGAAGTGATAGCTGATAGGATTCAGAGCTCTACCTTGCTGAAAGAAGAACCCCAAGTATCTGGAAGAGAGTCAACATCTGTGAGTGGTGCAAATATAATAGAAGATTTGATGCAAAATCATGATGTTCTACTTAGTGCCCTTCGTTCTCGCCTCACAAAGCTGCAGATGGTACGGCACTTGTGGGAACGGAATGACATCAAGGGTGCAATTAACGCACTGAGGAAGTTACCTGATCATTCGGTCCAGGCTGATGTGATTAGTGTTCTTATGGAGAAAATGGAAATGGTTACCATGGATTTGTTTTCATGTATGCTACCAGTACTAGTGGGCCTTCTGGACAGCAAGATGGAAAGGCATGCAAAAATGTCTTTGGAGATGCTACTCAAACTTGTTGCGATGTTTGGGCCAACAATCCGCTCCACAATCTCAGCACCTCCTTCTGTGGGTGTTGATCTTCACCAAGAAGAGAGGATTGAGAGCTGTAGACGGTGCTTTGGCCAGCTACAACAGATCCAACAAGTTCTTCCTGCACTTGCAAGGAGAGGTGGTTCGCTCGCTAAATCAGCTCTTGAATTGAGTCTAGTTCTCCAAGATCATAATGTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_26789.p1 GENE.S_Transcript_26789~~S_Transcript_26789.p1 ORF type:complete len:763 (+),score=178.42,Katanin_con80|PF13925.2|3.4e-53,WD40|PF00400.28|0.005,WD40|PF00400.28|0.0062,WD40|PF00400.28|8.4e-06,WD40|PF00400.28|1.1e-08,WD40|PF00400.28|5.9e-07,WD40|PF00400.28|5.3,eIF2A|PF08662.7|0.06,eIF2A|PF08662.7|0.0027,eIF2A|PF08662.7|68 S_Transcript_26789:308-2596(+)
MAKRGYKLQEFVAHSANVNCLRIGKKACRLLLTGGDDHKVNLWSIGKPTSLMSLCGHTSPVESLAFDSTEVLVLAGASSGTVKLWDLEEAKMVRTLAGHRSNCTSLEFHPFGEFFASGSADTDLKIWDIRKKGCIHTYKGHNLGINTIKFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHDGHIRSLDFHPLEFLLATGSADRTVKFWDLETFEMIGSSRAEATGVRAITFHPDGRTLFSGYDNSLKVHSWEPLICHDAVDMGWSTLGDLSISEGKVIGCSYYRNSIGVWVADLSRIEPYGNGDASQDTNPIDVKLETRESLSAEKVGSSPRSNMESRSTSPDNDAKDIKNIYVDYEKPISSKKIGPRSTSRVVSSFSKETSKLSAKKQSPANATPGKSNSQARGRSFVVPSFVPRESSGSKNFSSSRRESFTPAKPSSGASMKAAHTRRPSNIKDDVVMEDTNSADRLVSELGAKELLDDNNSTLKSVEVKSEINSSPTISFNLQSGDDSADCKETKSVKVLNGAAVAHGRTRSLVEKFERRGKPSFSDDQMTSTSPEVIADRIQSSTLLKEEPQVSGRESTSVSGANIIEDLMQNHDVLLSALRSRLTKLQMVRHLWERNDIKGAINALRKLPDHSVQADVISVLMEKMEMVTMDLFSCMLPVLVGLLDSKMERHAKMSLEMLLKLVAMFGPTIRSTISAPPSVGVDLHQEERIESCRRCFGQLQQIQQVLPALARRGGSLAKSALELSLVLQDHNV*

Click here to download the sequence:
Link to NCBI Protein BLAST