Transcript Information: S_Transcript_267900.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value2E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.3847595050501
Replicate 28.0858391048484
Replicate 37.7247062130264
Condition 2: 8 Hour
Replicate 17.5922855579322
Replicate 23.2796427325254
Replicate 37.3656855598365
Condition 3: 24 Hour
Replicate 19.9502872444068
Replicate 25.2209827715146
Replicate 39.5077863726092


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_267900.p1 GENE.S_Transcript_267900~~S_Transcript_267900.p1 ORF type:internal len:191 (-),score=2.57,gag_pre-integrs|PF13976.2|1.8e-11 S_Transcript_267900:2-571(-)
TTTTCTCACTCTGCCACTCCTATAAAATTATCTAATGTCCTTCATGTTCCGTCTATTTCTCGAAACATAATTTCCATTTCACAATTTTGTCAAGATAATCATGCTTCTATAGAATTCTCACCAACTTCCTTTTGTGTGAAGGATCTCCCAACGGGGAAAACTCTATTCCAAGGTCCGGTTAGATCGGGGATTTATGAACTACATCCATCTTCACCTTCTGTTTTTGCAAGCACAAGCTCAACTTCTTTCGACTGGCATCATCGATTAGGTCATCCTTCATTAAAAATAATCAAATATCTCAGTTCTGTATTTCATTTTAGTGTTCCTAAACACTCTAGTTCAGACTTTTGTAATTCTTGTGCTTGTAATAAAAGTCATCGTCTTCCTTTCTCAACTTCTACTATTACTTCTACTGCTCCCCTCCAATACATTTATACTGACTTATGGACCTCTCCTCTATATTCTTATGATGACTACAAATATTATTTAATATTTGTTGATCACTTCACTAAGTACATATGGTTCTACCCTCTTAAACGAAAATCCGACACTAAAAATATTTTTATGCGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_267900.p1 GENE.S_Transcript_267900~~S_Transcript_267900.p1 ORF type:internal len:191 (-),score=2.57,gag_pre-integrs|PF13976.2|1.8e-11 S_Transcript_267900:2-571(-)
FSHSATPIKLSNVLHVPSISRNIISISQFCQDNHASIEFSPTSFCVKDLPTGKTLFQGPVRSGIYELHPSSPSVFASTSSTSFDWHHRLGHPSLKIIKYLSSVFHFSVPKHSSSDFCNSCACNKSHRLPFSTSTITSTAPLQYIYTDLWTSPLYSYDDYKYYLIFVDHFTKYIWFYPLKRKSDTKNIFMR

Click here to download the sequence:
Link to NCBI Protein BLAST