Transcript Information: S_Transcript_268415.p1


Annotated TAIR IDAT5G60820.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24469636-24470895 | Forward length=419
E-Value9.1E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1141169205517
Replicate 21.0309714746502
Replicate 31.3788961557832
Condition 2: 8 Hour
Replicate 10.79721085297693
Replicate 20.62724809270261
Replicate 32.8885961707685
Condition 3: 24 Hour
Replicate 10.61247336889516
Replicate 20.42362264628687
Replicate 31.2964602264312


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_268415.p1 GENE.S_Transcript_268415~~S_Transcript_268415.p1 ORF type:complete len:214 (+),score=30.01,zf-RING_2|PF13639.2|6.3e-14,zf-RING_11|PF17123.1|3.3e-09,zf-rbx1|PF12678.3|1.4e-06,zf-C3HC4_2|PF13923.2|7.1e-07,zf-C3HC4|PF00097.21|1.3e-06,zf-RING_5|PF14634.2|1.3e-05 S_Transcript_268415:402-1043(+)
ATGGTTCAGCTGCTGGCTGACTCACCACGCCGACCAACTGTCAGTACCAGAATTTTACGACAAACCACACCAGTGTTGACCCCACCAATACCCGTCTCACCACCAGAGCACGCGCTTTCTTGGGTGGCTAATCAGGATCCCCCGTCTGCCCCTACTGCATCGTCTGCACCAGAATGTGCACCAGTTGTCAGAATGACAGCAAGTATGTTGCACCAGGAACCTTCGTGTCCTGTATGTAAGGAAGAGTTTGTGGTCGGTGAAGAAATCAGAGCAACTCCTTGCAGTCATTTCTACCATTCTGATTGCATTCTTCCTTGGCTTCAGACTCACAACACTTGTCCCGTCTGTCGCTTCCAACTTCCTATCCCTCGACCAACTCCTTCCAGTTCAATCAATACTGATAATGGTGGCGGATTTCAGAGCCGTGCAGATATTGATGACGATGATTTTAATGAGAATTTCCGGTTTGAGGATGTTCTGAACCTCAACTGGCCTACCTGGGCCGACATCATCTCTTTGTGGCCTTTTCGGTTTGGGTCCTTCTTCAACCGGACCTTTCAAGATCATGATCATGGTTCGCTTAATAACACTCCTTCAAGTAGATCAGCATTGTCCTGGTGGCGCTTCCTGAGAGTTCTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_268415.p1 GENE.S_Transcript_268415~~S_Transcript_268415.p1 ORF type:complete len:214 (+),score=30.01,zf-RING_2|PF13639.2|6.3e-14,zf-RING_11|PF17123.1|3.3e-09,zf-rbx1|PF12678.3|1.4e-06,zf-C3HC4_2|PF13923.2|7.1e-07,zf-C3HC4|PF00097.21|1.3e-06,zf-RING_5|PF14634.2|1.3e-05 S_Transcript_268415:402-1043(+)
MVQLLADSPRRPTVSTRILRQTTPVLTPPIPVSPPEHALSWVANQDPPSAPTASSAPECAPVVRMTASMLHQEPSCPVCKEEFVVGEEIRATPCSHFYHSDCILPWLQTHNTCPVCRFQLPIPRPTPSSSINTDNGGGFQSRADIDDDDFNENFRFEDVLNLNWPTWADIISLWPFRFGSFFNRTFQDHDHGSLNNTPSSRSALSWWRFLRVL*

Click here to download the sequence:
Link to NCBI Protein BLAST