Transcript Information: S_Transcript_268658.p1


Annotated TAIR IDAT2G13770.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); Has 451 Blast hits to 352 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 8; Plants - 388; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:5736603-5737847 | Forward length=343
E-Value6E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.80039101459189
Replicate 20.16588563577079
Replicate 30.277334377197
Condition 2: 8 Hour
Replicate 10
Replicate 20.33641877653724
Replicate 30.32053906172904
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_268658.p1 GENE.S_Transcript_268658~~S_Transcript_268658.p1 ORF type:complete len:133 (+),score=13.96 S_Transcript_268658:667-1065(+)
ATGTTACCCACAATTGAGAGGTTGGTGCATCATAGAATTTATATACCCAGAGATCATGAGGATGCTCTCTCTCGCTTAATCACAGATTACTTTGCCCCTAATACAAGGTATCATAATAAAAAATTTCATCGTAGATTTCGTATGCAAAAGCATGTGTTCCTTTGTATCATGGAATCTTTAAATGCAAATGATGTGTTTTTCCAACAACTTCCGGATGCTACTAGAAGAATAGGGTTATCCATGGAACAAAAATGCATTGTTGCAATACGAATGTTGGACTATAGTGTGACTGCTGACATAGTTGATGAGTATCTAAAAGTTGCAGAAACTACTGCTAGAGAATACCTCTTAAAATTTATTGAAGGTGTCATTGTAGAATTTGGAAACCAATACCAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_268658.p1 GENE.S_Transcript_268658~~S_Transcript_268658.p1 ORF type:complete len:133 (+),score=13.96 S_Transcript_268658:667-1065(+)
MLPTIERLVHHRIYIPRDHEDALSRLITDYFAPNTRYHNKKFHRRFRMQKHVFLCIMESLNANDVFFQQLPDATRRIGLSMEQKCIVAIRMLDYSVTADIVDEYLKVAETTAREYLLKFIEGVIVEFGNQYQ*

Click here to download the sequence:
Link to NCBI Protein BLAST