Transcript Information: S_Transcript_26873.p1


Annotated TAIR IDAT1G72370.1
Annotated Gene Name40s ribosomal protein SA
Annotated Gene Symbol(s)P40, AP40, RP40, RPSAA
Annotation TypeOrtholog
Chromosome Positionchr1:27243148-27244842 | Reverse length=298
E-Value4.6E-140
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1238.00654347895
Replicate 2197.96881440797
Replicate 3214.33450043103
Condition 2: 8 Hour
Replicate 1213.08099460119
Replicate 2201.22570884597
Replicate 3195.8753563701
Condition 3: 24 Hour
Replicate 1147.30536299739
Replicate 2164.09824652171
Replicate 3150.85509261763


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_26873.p1 GENE.S_Transcript_26873~~S_Transcript_26873.p1 ORF type:5prime_partial len:370 (+),score=101.04,Ribosomal_S2|PF00318.16|2e-09,Ribosomal_S2|PF00318.16|2e-11 S_Transcript_26873:1-1110(+)
AAAAGGGGGGGAAAAAAAATTCTCCATCTTGGGCCCGTGGCCCTTTATCTCATAAGGACGACTAGGGTTTATCGTTCCTCACAATATTTGCCCACTTCTTGCCACATTCTTCACCTCTGCCGGGACTCAAAACTCTCTCCGCAGACAAAGAGCAGAGAAACTCTCGGCAAAGCAAAAATGGCGACAAATGGGGTACCAAGAGCTTTGTCTCAGAAAGAAGAAGACATCCTGATGATGCTTGCTGCCGATGTTCATCTTGGCACCAAAAACTGTGACTATCAGATGGAACGTTATACTAATAGCCGCCGCACTGATGGTATTTACATTATTAATCTTGGAAAGACCTATGATAAAATGGTGCTGGCCGCTAGGACTATTGTGGCCATTGAGAATCCTCAGGACATCATTGTCCAGTCAGCCAGACCCTATGGTCAGAGAGCTGTGTTGAAGTTCGCCCAGTACACTGGGGCCCAGGCAATTGCAGGAAGACACACTCCTGGAACCTTCACCAATCAGCTCCAGACTTCCTTCTGCGAGCCTCGCTTGCTGATTCTGGCTGACCCACGTACTGATCACCAGCCCATCAAAGAAGGAGCACTTGGGAACATCCCAACCATTGCTTTCTGTGACACTGATTCCCCAATGCGTTATGTTGACATTGCCATCCCTGCAAATAACAAAGGAAAGCACAGCATTGGCTGCCTGTTTTGGATGCTTGCAAGAATGGTTCTTCAGATGCGTGGAACTATTCGTCCTGGACAGAAATGGGATGTGATGGTTGACTTGTTCTTCTACAGAGAGCCAGTGGAGACCGAAGTAAAGGAGGAAGAGGAAGCTGTTGTTGCTGATTATGTTCCTGATTTTGGTGCCCCTGCTCTTGGTGGTGACCAATGGACTTCAATTTCAGAGGGACAATGGGGTGCAGAGGTGGCTGCTCCTGCTCCTATTCCTGCTGTTCCCAGTGTGGACTGGGCTGGTGTTCCAGCTCAACCTGCTGCGGCTGGTGATGGTTGGGATGAGGCTCCCGCTCCAGCTCCTGCTCCTGCTCCTGCTCCTGCTCCTGCTCCTGCTCCAACTGCAGCTGCAGTTCCAGCACCTACTGGCTGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_26873.p1 GENE.S_Transcript_26873~~S_Transcript_26873.p1 ORF type:5prime_partial len:370 (+),score=101.04,Ribosomal_S2|PF00318.16|2e-09,Ribosomal_S2|PF00318.16|2e-11 S_Transcript_26873:1-1110(+)
KRGGKKILHLGPVALYLIRTTRVYRSSQYLPTSCHILHLCRDSKLSPQTKSRETLGKAKMATNGVPRALSQKEEDILMMLAADVHLGTKNCDYQMERYTNSRRTDGIYIINLGKTYDKMVLAARTIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQTSFCEPRLLILADPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIAIPANNKGKHSIGCLFWMLARMVLQMRGTIRPGQKWDVMVDLFFYREPVETEVKEEEEAVVADYVPDFGAPALGGDQWTSISEGQWGAEVAAPAPIPAVPSVDWAGVPAQPAAAGDGWDEAPAPAPAPAPAPAPAPAPTAAAVPAPTGW*

Click here to download the sequence:
Link to NCBI Protein BLAST