Transcript Information: S_Transcript_268863.p1


Annotated TAIR IDAT4G20325.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Ribonuclease H2, subunit B (InterPro:IPR019024); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:10980124-10982426 | Forward length=277
E-Value1E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.958294626251
Replicate 28.6520743362803
Replicate 311.571912836769
Condition 2: 8 Hour
Replicate 112.823110517492
Replicate 214.768344526878
Replicate 314.071245804596
Condition 3: 24 Hour
Replicate 15.4255266185789
Replicate 29.3321577079078
Replicate 37.4182483544459


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_268863.p1 GENE.S_Transcript_268863~~S_Transcript_268863.p1 ORF type:complete len:153 (+),score=29.30,RNase_H2-Ydr279|PF09468.6|2.7e-05 S_Transcript_268863:1-459(+)
ATGAGTGTTGTTTGCGACATCAAAGAAATCGGGTCGACAAAGTTTTTCAGGCTTGATGATTCCAAGGTGCTTGCTTGGTTGTGTGGAAAGGTTAAACGGTTAAAACAGACTTTGCTCACATTGGACAAGAATTATGCTGGTCAGGATGACAGGCATACATTGGCTGAGGTGGTGTCAATATTGGGAGAGTATTTGAGGGACGAGCCTTGGATGGAACTTTTGTGTAGCCACCTCAGGCTCACTTTACAAGATTTGACAAGAAAAGCCGATGATCCTTGTTCATCTATGCCAGACGATGCGCTTCAATCCTCTCCTCAGGGAAACGGAGGAGTAGAGCTAACAAACAAGAAAACCGCCAAGACAGGGAGGCAAGCGAAGAAGGTGAAGGTGGAGAAAGACTCACATAATATAAAAGACATGTTCACCAGAGCAACAAGAAGCAAAGCCAAAGCCACTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_268863.p1 GENE.S_Transcript_268863~~S_Transcript_268863.p1 ORF type:complete len:153 (+),score=29.30,RNase_H2-Ydr279|PF09468.6|2.7e-05 S_Transcript_268863:1-459(+)
MSVVCDIKEIGSTKFFRLDDSKVLAWLCGKVKRLKQTLLTLDKNYAGQDDRHTLAEVVSILGEYLRDEPWMELLCSHLRLTLQDLTRKADDPCSSMPDDALQSSPQGNGGVELTNKKTAKTGRQAKKVKVEKDSHNIKDMFTRATRSKAKAT*

Click here to download the sequence:
Link to NCBI Protein BLAST